Silurus meridionalis (southern catfish): 124388073
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Entry
124388073 CDS
T08004
Symbol
nectin4a
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
smeo04517
IgSF CAM signaling
smeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
124388073 (nectin4a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124388073 (nectin4a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124388073 (nectin4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124388073 (nectin4a)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Nectin family
124388073 (nectin4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
C2-set_2
Protocadherin
Ig_VEGFR-1-like_5th
DUF5305
TMEM154
TM_ErbB1
EphA2_TM
Tcell_CD4_C
Adeno_E3_CR2
EzrA
Motif
Other DBs
NCBI-GeneID:
124388073
NCBI-ProteinID:
XP_046708666
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All DBs
Position
6:complement(12551153..12563896)
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AA seq
633 aa
AA seq
DB search
MAVLSRLRILLIWNLLVCVTGGTLVEPTSANVYTTAEEEVILPCKVLPSEGEVIVQVIWM
HIKPDGSEEQIITVHHEAGQLESPAYAGRVRFESSTPMIDSSLRILNTKLSDEGRYVCTI
AIFPSGSVKKQVSLTVWTKPISTLDPFVLVEGQPFRLAATCRAMAKPQAGLSWDTDLPGQ
SQNRSLENGVTSIQYSLHPLRSMNGRKLDCLVWHPSLQSPLRIENKLEVQYPPDATISGY
DENWYVGLEGAQLQCEAGGKPKPHNFTWTRKDGSLPDGVTVENEIMRFDRPLRLTDNGTY
ECVATNTVGSEKVHLKIEVTEEPKNPTSLNSLLLIITGAVAGLLVLILVIVVITVNRHHK
RKNQQLALELNEKKEEISTLSRQASIRRVASTSIDNKYQMEELIPLRVEGTIRTSLSSLD
RPRSRDSHSTLGGVDSLGRPALYNTSRRGRERTMDREKDLERVPSRVKVDPYGRNSDASL
VHPESHFHPPLQLSNFSVEQTAEIIRSRNGSAILPADGRPQSGGGSITSIRAGSRGHHSP
LNLTYPMLPDDEDMRPVDEASEFSRGQIEPDGMDNGGSETASSQISEAMSNHFEHTNGTL
WPKAKPNNILLAPETTRLHPVHSNMNHHAPQIV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttaagtcgtttgaggattttacttatctggaatttgttggtctgtgtaact
ggtggaacattagtggaacccactagtgcaaatgtgtatacaacagcagaagaagaagtg
atcctgccgtgtaaggttctgccatcagaaggtgaagtgatcgttcaggttatctggatg
cacattaagccagatgggagcgaagagcagatcataactgttcatcatgaggctggacag
ctagaatctcctgcttatgcaggccgcgtgcgctttgaatccagcacccccatgatcgat
tcttctctgaggatcctgaacactaagctttccgatgagggacgctatgtctgtaccatt
gctatatttcctagtggaagtgtaaaaaaacaagtgtctcttactgtgtggactaagccc
atctcgacattggaccctttcgttctagtagagggacagccttttcgactggccgccacc
tgccgtgcaatggctaaacctcaggctggtctctcgtgggacacagatttgcccggccag
agccagaaccgcagtctggaaaatggcgttacttccatccaatactctcttcaccctctg
aggagtatgaatgggcgcaagctggactgtcttgtctggcatccttctctacaaagtcca
ctgaggatcgaaaataaactcgaagtgcaatacccaccggatgcaacaatctcaggttat
gatgagaactggtatgtaggtctggagggtgcgcaactacagtgtgaggcgggaggaaaa
cccaaaccacacaacttcacctggaccaggaaagatggcagtttaccagatggtgtgacc
gtggagaacgaaataatgcgatttgacaggcctctcagattaacagacaatggaacgtat
gaatgtgtggccaccaatactgtgggttctgagaaagtgcacctgaaaatcgaagtaaca
gaggaacccaaaaatccgacatcgttaaacagcctcctgctgatcatcactggagcagtt
gcggggcttttggtgctcatcctagtgattgtagtaataacagtaaaccgacatcacaag
cggaaaaaccaacagctggctttggagctgaatgagaaaaaggaagaaattagcactcta
tccagacaggcctcgatcagaagagttgcctcaaccagcatagataataaataccagatg
gaagagctcataccattaagagttgaaggaacaatacggaccagcctcagttcattggat
cgaccccgctctcgagacagccattccactttaggtggagtagacagtctgggtcgacct
gccctttataacacatccagacgaggcagggaacgaacgatggacagagagaaagattta
gagcgagttcccagtcgagtgaaagtggacccttatggcaggaacagcgatgcatctttg
gtgcatccggagagccacttccaccctcctctacagctttccaatttttcagtggagcag
actgctgaaattatccggtctcgaaacggtagcgccatcctaccagcagatggcagacca
caatcaggaggaggcagcataactagcatcagagcaggcagcagagggcatcattcccca
ttaaatttaacctaccccatgcttccagatgacgaagacatgaggccagtcgatgaagcg
tcagagttttccaggggccaaattgaacccgacggcatggataacggaggcagcgagacg
gcaagctcgcaaatctcagaagcaatgtccaatcactttgagcatactaacggtacgctg
tggcccaaggcgaaaccaaacaacatcttattagcaccagagaccactcgattacaccct
gtacattcaaacatgaatcatcacgcgcctcagatagtgtaa
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