Silurus meridionalis (southern catfish): 124388370
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Entry
124388370 CDS
T08004
Symbol
dock1
Name
(RefSeq) dedicator of cytokinesis protein 1 isoform X1
KO
K13708
dedicator of cytokinesis protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04148
Efferocytosis
smeo04510
Focal adhesion
smeo04810
Regulation of actin cytoskeleton
smeo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124388370 (dock1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124388370 (dock1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124388370 (dock1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124388370 (dock1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388370 (dock1)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124388370 (dock1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOCK
DOCK_N
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
SH3_1
SH3_2
SH3_9
SR-25
Motif
Other DBs
NCBI-GeneID:
124388370
NCBI-ProteinID:
XP_046708877
LinkDB
All DBs
Position
7:complement(19984591..20254359)
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AA seq
1884 aa
AA seq
DB search
MSRWIPTKKEKYGVAIYNYDARSEEELSLQIGDTVHILETYEGWYRGHRLRRRSKKGIFP
TCFIHLKEATVEGSGPKETVIPTELPLVHEVTTTLREWASIWRDLYVGDKREMFNTVRDM
IYDLIEWRSQILSGTLPQDELSELKQKVTSKIDYGNKVLDLDLVVRDKDGNILDPELTST
VNLFRAHEAASRQIDERIQEEKSQKQNLDLSRQAKFASTPSFALFVTLKNVVCKIGEDAE
VLMSLYDSNEYKFISENYLVRWSSSGLVKDIDQLHNLRAVFTDLGSEDLKREKISFVCQI
VRVGRMELRDNNTKKLTSGLRRPFGVAVMDVTDIITGKMDDEDKQHFIPFQPLALDDAIR
HRQLNISRFSPRVAGENDFLQSVINKVISAKEVNHKGQGLWVTLKLLPGDIHQIRKDFPH
LVDRSTAVARKMGFPEIIMPGDVRNDIYVTLTHGDFDKGSKTTPKNVEVTMSVYDEEGKR
LENVIFPGAGDEGFTEYKSVIYYQVKQPRWFETIKVAIPIEDVNRSHLRFTFKHRSSQDS
KDRSEKIFALSFVKLMRYDGTTLRDGEHDLIVYKAEAKKLEDSSFYLSLPATKLELEEKG
HFPTGKSSQSLGNCTISKDSFQIATLVCSTKLTQNVDLLGLLKWRSNTSLLQQNLCHLMK
VDGGEVVKFLQDTLDALFNIMMENSDSDTFDTLVFDALVFIIGLIADRKFQHFNPVLETY
IRKHFSATLAYTKLTKVLKNYVDHAEKLTDQLLKAMKALEYIFKFIVRSRVLFNQLYENK
GESDFMESVRELFSSFGEMMNSEAESTSMVKGAALKYVPTIVNDVKMVFDPKELSNLFSK
FIQEVPQGRLVKQKLYCMIDIVHSDLFTQHDCREILLPLMTEQLKKHLEQQEDLEACCQL
LSNILEVLYRSDVGPTQWHIQIIMEKLLRTVNRTVISLGRDSPLIGSFVASMTATLRQMD
DYHYTHLINTFGKMRTDVVDFLMETFIMFKDLIGKNVYPTDWVIMNMMQNKVFLRAINQY
AAVLNKKFLDQTNFELQLWNNYFHLAVAFLTQESLQLENFSSDKRAKIFQKYQDMRRQIG
FEIRDMWYNLGPHKIRFIPEMVGPILEMTLVPEIELRKATIPIFFDMMQCEFHFTRSFQR
FENEIITKLDHEVEGGRGDEQYKILFQKILLEHCRKHKYLAKSGENFVSLVVRLLERLLD
YRTIMHDESKENRMSCTVNVLNFYKEIEREEMYIRYLYKLCDLHKECDNYTEAAYTLLLH
AKLLKWSEEACAAHLTQRDGYQASTQGQLKDQLYQEIINYFDKGKMWEESIILGKELAEQ
YENEMFDFEQLSALLRKQAQFYENIVKVIRPKPDYFAVGYYGLGFPSFLRNKMFIYRGKE
YERREDFEARLLTQFPNAEKMKTTTAPSDELRHSSGQYIQCFTVKPMLELPPKFRNKPVC
EQIVSFYTINEVIKFQYSRPIRKGEKDPDNEFANMWIERTTYVTAYKLPGILRWFEVISV
SAEEISPLENAMETMQLTNEKINNMVQRHLNDPNLPINPLSMLLNGIVDPAVMGGFTNYE
KAFFTEKYMQEHPEDHEKIDKLKDLIAWQIPYLAEGVRIHGEKVTEALRPFHERLEACFK
QLKEKVEKQYGVKSLPPMADERRGTRPRSMVRSFTMPSSQRPLSVVSVTSLSSDNSPSRP
GSDGFALEPLLPKKQHFKSQDKLDRDDPEKDKKEKKKEKRNSKHQDLFDKELKATDIPMQ
PAEAVILSETISPLRPQRPKSQVVNVMGDKRLSVSPGPGVQQTSSTLPPPITPRVKLTFS
LLSSSNLELNGTGYGEVPPPLPIKSNMGDYGNLMENPELASPTTPPPPPLHQRHLPPPLP
SKTPPPPPPKATRKQTSIDSGIVQ
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgctggattcctaccaagaaggagaagtacggcgtcgcgatctataactatgat
gctcgcagtgaggaggagctttctctccagattggagacacagtgcacatactggagacg
tacgaaggctggtacaggggacaccggctgaggaggcgctcgaaaaagggcatatttcct
acctgtttcattcatctaaaagaggccacagttgagggcagtgggccaaaggagacagtc
attcccacagagctgcctctggtgcatgaggtcaccaccacactgcgtgaatgggcttcc
atctggagggacttgtatgtgggtgacaagcgtgagatgtttaatactgttcgtgacatg
atctacgatctaatcgagtggcgatcacagattctgtcaggaactcttcctcaagacgag
ctttccgaactcaagcagaaagtcacctccaagatcgactatggcaacaaggttttggat
ctggatctagtggtcagagataaggatggcaacattttggacccggagctcaccagtacc
gtcaacctgtttcgagcacacgaggctgcatccagacagatcgacgaacgcattcaggag
gaaaagtctcagaaacagaatctggatctgagtcgacaggccaagtttgcttccacgcca
tcatttgctcttttcgtgacgttgaagaacgtggtgtgcaagatcggagaggacgctgag
gtgctaatgtctctctacgactccaatgagtacaaattcatcagcgaaaactatcttgtc
cggtggtccagctctggtctggtcaaagacatagatcagcttcacaaccttcgagctgtg
ttcacagatctgggcagcgaggatctgaagcgagagaaaatcagctttgtgtgtcagatt
gttcgagttgggcgcatggaactgcgagacaacaacactaaaaagctgacgtccgggctc
cgaaggcctttcggagtggcagtaatggatgtcactgatatcatcactggcaaaatggat
gacgaagacaagcagcacttcatcccttttcagccgcttgcgctggatgacgccatccgc
cacaggcagctgaacatctcccgtttttcacccagggtggcaggagagaacgacttcctc
cagagcgtcatcaataaagtcatcagcgccaaagaggtcaatcacaagggccaagggctt
tgggtcacgctgaagctgttgcccggtgatattcatcagatccggaaggacttcccccac
ctggtggaccgctccactgccgtcgcccgcaaaatgggcttccctgagatcatcatgcca
ggtgacgttcggaatgacatttatgtgacgctgactcatggggactttgataaaggcagt
aaaaccacacccaagaatgttgaagtcaccatgtctgtgtatgatgaggagggcaagaga
ctggagaacgtgatctttcctggtgctggagacgagggatttacagaatacaagtccgtc
atttactaccaggtcaaacagccacgctggtttgagaccatcaaggtggccatcccaatt
gaggatgttaacaggagtcatctccgctttactttcaagcatcgctcttctcaggactcc
aaagacaggtcagaaaagatctttgccttgtctttcgtgaagctgatgagatatgacggc
acgacacttagggatggagaacacgatcttatcgtctacaaggctgaggctaagaagctg
gaggactcctctttctatctgagcctgccagccaccaagctcgagctagaggagaaaggc
cacttccccacaggcaagagctcacaaagcctgggcaactgtaccatcagcaaggactcc
ttccagattgctactctggtgtgttccaccaagctcacacagaatgtggatctgcttggc
ttgctgaaatggcgctcgaacaccagcctgctccagcagaacctgtgtcacctaatgaag
gttgacggaggagaagtggtcaagttcttgcaggacaccctggatgcgttattcaacata
atgatggaaaactctgacagtgacacgtttgacacactggtgttcgatgccttggtgttt
atcattggattgatagcagacagaaagttccagcacttcaaccctgttttggagacgtac
atccggaaacacttcagtgccaccctggcttacacgaaactgacaaaggttttgaagaac
tacgtggaccatgcggagaagttgacagaccaactgttgaaggccatgaaggctctggag
tacatcttcaagttcattgtgcgatctcgagtcctcttcaaccaactgtatgagaataaa
ggagaatcagactttatggagtcagtaagggagctcttctcctcgttcggggaaatgatg
aacagcgaagctgagagcaccagcatggtcaagggcgcagccttgaaatatgttcctacg
atcgtcaatgacgtcaaaatggtctttgaccccaaagagctcagtaatctgttcagcaaa
ttcatccaggaggtgccacaaggtcgcttggtcaagcagaagctctactgcatgattgac
atcgtccacagtgacctcttcacacaacacgactgcagagagattcttttgccgcttatg
accgaacaactgaagaaacacttggagcagcaagaggatctggaggcctgctgccagctg
ctcagcaacatcctggaggtgttatacaggagtgatgtgggtccaacacaatggcatatt
cagatcattatggagaagttattgaggacagtgaacaggacggtgatctcactgggacgc
gactctcctctcatcggcagctttgtggcaagtatgacggctacactccgacagatggac
gactatcattatactcacctgatcaacaccttcggaaagatgagaacagatgtggtggac
ttcttaatggaaacatttatcatgttcaaagacctcatcgggaagaacgtctaccctact
gactgggtcatcatgaacatgatgcagaacaaagtcttcctgcgagccatcaatcaatac
gcagccgtgctgaacaagaagttcctggaccagaccaactttgagcttcagttgtggaat
aactactttcacctggccgtggccttccttacccaggagtctttgcagctggagaacttc
tcaagtgacaaacgagcgaaaatctttcagaagtatcaggacatgaggcgccagattggt
tttgagatccgggacatgtggtacaacctgggtccacacaagatcaggtttatccctgag
atggtggggccaattctggagatgacactcgtaccagagattgagctgcgcaaagcaact
atccccatcttcttcgacatgatgcagtgcgagttccacttcacacgcagtttccaacgg
tttgaaaacgagatcatcacgaagctggatcacgaggtggaaggaggccgcggagatgag
cagtacaaaattctcttccagaagatcctcttggagcactgtaggaagcataaatacctt
gcaaagagtggggagaactttgtgagtctggtggtgcgtctgctggagaggttgctggac
tacaggactatcatgcacgatgagagcaaggagaaccgcatgagctgtacagttaatgtg
ctgaatttctacaaggagatcgagagggaggagatgtacatcaggtacctgtacaaatta
tgtgacctgcataaggagtgtgataactacactgaggctgcctacactctattgctgcat
gccaagcttctcaagtggtcagaagaggcctgtgcagctcacctgactcagagagacgga
taccaggcgagcactcaaggtcagctcaaggaccagctttatcaggagattatcaactat
ttcgacaaggggaagatgtgggaggagtccatcatcctgggaaaggagcttgcagaacag
tacgagaatgagatgtttgactttgagcagctcagtgctttactgaggaagcaggcacag
ttctatgagaacatagtgaaggtgatcaggcccaaaccagactacttcgctgtgggttat
tatggtctgggtttcccttcattcctcaggaataagatgtttatctaccgtggaaaagag
tacgagcgaagggaggattttgaagcgaggctgcttacacagttccccaatgcagagaag
atgaagactaccacagcccctagcgatgagctccgccattcttccggccagtatattcag
tgtttcacagtgaagccgatgcttgagctgcctccaaaattccgaaacaagcctgtgtgt
gagcagatagtcagtttttacaccatcaacgaggtcatcaagttccagtactccagaccc
atccgcaaaggcgagaaagacccggacaacgaatttgctaatatgtggattgaaaggact
acatatgtcacagcctacaagctccctgggatcctgcgctggttcgaagtcatctccgtc
tctgcagaagaaattagccctctggagaacgccatggagaccatgcaactgacaaatgag
aaaatcaacaacatggtccagcgtcatcttaatgaccccaaccttcccatcaaccccctg
tccatgctgctcaatggtattgtggaccctgctgtgatgggtggctttactaactatgaa
aaggcgtttttcacagagaagtacatgcaggagcaccctgaggaccacgagaagattgat
aagctgaaagacctgatcgcctggcagattccgtatctggcagaaggtgtgcgcattcat
ggtgagaaggtgaccgaggccctgcgaccattccatgagcgtctggaggcatgcttcaaa
cagttaaaagagaaggtggagaaacagtatggtgtgaaatccctgcctccgatggcggat
gagcgtcgtggcacacgtccgcggtcgatggtgcgctccttcaccatgccatcatctcag
aggccgctttctgtcgtgtctgtcacctccttatcatcagacaactcaccatcaagacca
ggatctgatggctttgctctggaacccctcctgccaaagaagcagcactttaagtctcag
gacaagctggaccgggatgatcctgaaaaagacaagaaggagaagaagaaagaaaaaaga
aacagcaaacaccaagatctattcgacaaggaactgaaggccacggacattcccatgcag
ccagctgaagcggtcatcctgtctgagacgatcagtccactgcgtccccaaagaccaaag
agtcaggtggtgaacgtaatgggagataagaggctctctgtgtccccaggacctggtgta
caacagacctcttctacccttcctcctcccatcactccaagggtcaagctcaccttcagc
ctgctctcctcctccaacctagaactgaatggaacaggctatggtgaggttccacctcct
ctcccaatcaaaagcaatatgggtgattatggaaacctgatggaaaacccagagctggcc
agcccaaccaccccacctcctcctcctctacatcagcggcatttgcctcctccgctgccg
agtaaaactccaccccctcctcctccaaaagccacaaggaagcagacgtccattgattca
gggattgttcagtga
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