Silurus meridionalis (southern catfish): 124388419
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Entry
124388419 CDS
T08004
Symbol
egr2b
Name
(RefSeq) early growth response protein 2b isoform X1
KO
K12496
early growth response protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124388419 (egr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124388419 (egr2b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
124388419 (egr2b)
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GFIT
Motif
Pfam:
DUF3446
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2HC_2
zf-C2H2_STOP2_C
zf-BED
zf-C2H2_15
C2CH-3rd_BIRD-IDD
DUF7565
zf-C2H2_ZNF462_1st
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
124388419
NCBI-ProteinID:
XP_046708955
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Position
7:7245825..7255382
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AA seq
420 aa
AA seq
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MMTAKTLEKSPVTFGSFVHPLTEGIYSLDEGTALPTSVAIFPNSDLGGHYDHLNGLAADG
LVGGDMSAEKRAVDLPYSSSFAQSAGPRSQTFTYMGKFSIDSQYPGNWNPEGVINIVSAG
ILGMTQASSTSSSPSSSSSVSPAHFSSTLSCTVAQGQTDMEQQHIYSPPPPYSGCAEVYQ
DPSAFLSTSTCPITSYPPPAYSSPKPCTDAGLFPILPDYTGFFQPPCQRDVQSMPERKPF
ACPLEPFRVPPPLTPLNTIRNFTLAAPVAEGARLPAAYSPQNLPLRPILRPRKYPNRPSK
TPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTH
TGEKPFACDYCGRKFARSDERKRHTKIHLRQKDRKAAASSSTSNSSVSAGGSNSTSGISQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgcaaaaactttggagaagagccctgtcactttcggcagtttcgtgcaccct
ctgactgagggcatctactcactggatgagggcacagcgctgccaacctcggtcgcgatt
tttccaaacagtgatctaggtggacattacgaccatttaaatggacttgcagcagatggc
ttggttggcggggatatgagcgcggagaagcgcgccgttgatctgccctactccagcagc
ttcgcgcagtcggctggtcctcgcagtcagacgtttacctacatgggcaagttctccatc
gactcccagtatccgggcaactggaacccagagggcgtgatcaacatcgtgagtgcgggc
atcctgggcatgacccaggcctcatcgacgtcctcttcgccgtcctcctcctcctcggtg
tctccggctcacttctccagcacgcttagttgcacggtggctcagggccagacggacatg
gagcagcagcacatctactcccctcctcctccctattcaggttgcgcggaggtctaccag
gacccgtccgctttcctgtcaacgtccacgtgccctatcacctcgtacccgccgccagcc
tattcctcccctaaaccctgtactgatgccgggctcttccccatcctcccggactacacc
ggctttttccaacccccgtgccagcgggacgtgcagtccatgcccgagcgcaaacctttc
gcatgcccactcgagcctttccgggtgccgccgccccttaccccactcaatacaatcagg
aacttcacgttggctgcaccggtggccgagggagcgcgtctccccgccgcgtacagccca
cagaacctgccactaaggcccatcctgcgcccgcggaaatacccaaaccggcccagcaaa
acgcctgtgcacgagcgcccgtacccatgccctgccgagggctgcgaccgtcgcttctcg
cgctcggacgagctcaccaggcacatccgcatccacacgggacacaagccgttccagtgc
cgcatatgcatgcgcaactttagccgcagcgaccacctgaccacacacatccgcacgcac
acgggcgagaagccgttcgcctgcgactactgcggccgcaagtttgcgcgcagcgacgag
agaaagcggcacaccaagatccacctgaggcagaaggacaggaaagcagcggcgtcctcg
tccacctcgaactcctcggtttccgcagggggctcaaactccacgtccgggatcagccaa
tga
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