Silurus meridionalis (southern catfish): 124388963
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Entry
124388963 CDS
T08004
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124388963 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124388963 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124388963 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124388963 (plekhm1)
Membrane trafficking [BR:
smeo04131
]
SNARE
SNARE associated proteins
Others
124388963 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
124388963 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
124388963
NCBI-ProteinID:
XP_046710072
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All DBs
Position
7:5120802..5141229
Genome browser
AA seq
1009 aa
AA seq
DB search
MLATQLTDSVPEAENAKQWIKEKIAQTLKTLQRRYVTTDSLVTSEESEANQLCCALEAVF
IHGLRSKFIRTEGAGARNRKAGPLPQPVFWNLLKAITHRDVIMELEGLSFINSDVGRCRA
WVRLALNDGLLECYLTSLLRESTQLGIHYQPGALLLDPEEREVLLSLLQGLASLAFQLSY
KSAVLNEWTTTPLALAGLCPPLPTEDWPPSSRRESCDTASLSSGSGGSGRGQEGRTSSDL
SLDNVSCHLSSSFGSERGSCCGKTENNSALDDSRISSPSIQDIIKNPDVPSPATDSMTES
FTHSSSDEDSSNKQDIQENLGPFTESSVPNELSVVLKEEPLGQESEEEQAEPVNILVDTR
QITVKDPEQDQDSPDTSYDTNSSIITCQLTSNSLNSNPPAVSISIDVALQKNSNNGSLHQ
TSNGLSSKTSTGSVYSHHKSSSWISEEDIYKPDNYANPEEPDDVESTQMNGAVSPVAEPE
AHLSPPSVVRRRQIGLSNPFRGLLKLGQLERRGPMGLWRTCYCELSPFELRLYSDDEERN
ICENRSLLRCEDVHLGSEGRFHLEFSGKRLQLRASCTAEAEDWVDRIFEAVSNVRHQPQD
DWDDLSPAVMPVSGPPEPANLPETDWSRPCEPEPDAIKEAVVLLSWEAQGWRLMVLSLSL
EALQGFSVQNDCKTRLFTYAIDAVRDVVPAVALGGPAFFKILTAKETLTAKAENGEEARI
WRSLIRKTLDSYLDEENETGGEMSSLNGGNVHRLVHHRLKGDAVLLPYLTVVPKEKGLNS
QNFKCAGCFRQIGVSLGRARLCEFSAQYYCDTCHQGDTTIIPSRMVHNWDLAAREVSRQA
MKLLAEIEQEPLLNLDLLNPNLFDHSETMATVQGFRQRLRLLGDYLLICRSGIRKKVEAR
LQQRTYLLESSHMYSVLDFRQIADGQYESFLQSLIQFSCNHVHHCDLCTQRGFICQICNT
DEIIFPFQFDTTSRCKVCKAVFHSTCKDQNDPCPRCERLQRYKERELLE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctacacagctaactgactctgttcccgaggctgaaaacgccaaacagtggatt
aaggagaaaatagcgcaaacactgaagacattgcagaggcgctatgtgaccacagactca
ctggtgaccagcgaggaatctgaggccaaccagctctgctgtgctctggaagccgtcttc
atccacggcctccggagtaaattcatccgcacagaaggagcaggagcacgtaaccgcaaa
gcaggcccgcttcctcagcccgtcttctggaacctacttaaagccatcactcacagagat
gtgattatggagctagaaggcctgagcttcatcaactctgacgtaggcaggtgcagggca
tgggtacgtttggcgctgaacgatggtcttttggaatgctaccttacttcacttctccgt
gagagcacccaactcgggatccactaccagcctggagccctgctcctcgaccctgaggag
cgggaggtgctgctcagccttctgcagggcctggcttcacttgctttccagctctcgtac
aaatcggcagtactcaacgagtggaccacgacccccctggcacttgctggtctgtgtcct
ccactgcctactgaagactggcctccgtcttcacgccgagaatcctgtgatacagcatcc
ctgtcctctggatccgggggctcggggcgaggtcaggagggcaggacttcctcagacctc
agcctggacaatgtgtcctgccatctctcttccagcttcggctcagaacgaggaagctgc
tgcggcaaaactgagaacaatagtgctcttgatgattctagaattagtagcccctccatc
caggatataataaaaaaccctgatgtgcccagccctgctacagacagcatgacggaatcc
ttcacccacagcagtagcgacgaagactcctctaacaaacaggatatacaggaaaacctt
ggccccttcacagagtcatcagttcccaacgagctctctgttgttttaaaagaagagccc
ttaggacaggaatcagaagaggaacaagcagagcctgtcaacattcttgtagatacaaga
caaatcacagtaaaagatcctgagcaggaccaagactctcctgacacttcctatgacact
aacagctctataataacctgtcagttgacctccaactcactgaattccaaccctcctgcc
gtgtcgatttctattgacgtggcgctgcaaaaaaactcaaataatggatctttacaccaa
acatctaatggtttgagcagcaaaacatccacaggctctgtctattcccaccataaatcc
agttcctggatctccgaggaggatatttataagccagataattatgcaaatcctgaagag
cctgatgatgtagaatccacccaaatgaacggggcagtatctcctgttgctgaacctgaa
gctcacctgtctccaccaagcgtggttcgccgtagacagattggcttatccaacccattt
cgaggccttctaaagctgggccagctggagcggcgcggtcccatgggtctgtggcgtaca
tgctactgcgagttgtcgccgtttgagctgcgcctgtactctgacgacgaagaacgaaat
atctgcgaaaatcgctcacttctgcgctgcgaggacgtgcacctgggctcagagggccgc
ttccatctggaattctccgggaagaggctccagctgcgggcgtcctgcacggcggaggct
gaggactgggtggatcgcattttcgaggctgtgagcaacgtgcggcaccaaccgcaggac
gattgggatgacctctcgcccgccgtcatgcccgtctcaggaccccctgagccagctaac
ctgcccgagacggactggagcaggccgtgtgagccggaaccagatgccataaaggaggct
gtggtgctcttaagctgggaggcccaaggatggcgtttgatggtgctttctctctcactg
gaggctcttcaaggtttttcagtgcaaaatgactgcaagacgcgtctttttacatatgca
atcgatgccgtgagagatgtggtgcctgctgtggcactcggtggccccgccttttttaag
attttgacagcgaaagagacactaacagcaaaggcggagaatggcgaggaggcacgtatc
tggaggagcctcatccgtaagacgctggattcctacctggacgaggagaatgagactgga
ggtgaaatgtcatcccttaatggaggcaacgtccacagacttgttcatcacaggctaaaa
ggggatgctgttctactgccgtatctgacagtggtccctaaagaaaaagggctaaattca
cagaactttaaatgtgcaggctgttttaggcagattggtgtatccttgggacgagctagg
ctgtgcgagttctcggctcaatactactgtgatacctgtcaccaaggtgacaccaccatc
attccctctcgcatggtgcacaactgggatctcgcggcacgtgaggtctccaggcaggcc
atgaagctgctggctgaaattgagcaggagcccttgctaaatctcgatcttttaaacccc
aacctgtttgatcacagtgaaaccatggcgaccgtgcaaggcttcagacagagactccgc
ctcctcggagattacctgctcatctgtcggagcggaatccggaaaaaagtcgaggccagg
ttgcagcagagaacatacctattggaatcaagtcatatgtatagcgtgctggacttcagg
cagatagcggatggccagtatgagtctttcctgcagagtctcatccagttctcttgcaac
cacgtgcatcattgtgacctttgcactcagcgaggcttcatctgccagatctgcaataca
gacgaaatcattttccctttccagttcgacaccacctccaggtgtaaggtgtgcaaagct
gttttccactccacctgtaaagaccagaatgatccttgtcctcgttgtgaacgtctacag
agatataaagagcgagaacttcttgaataa
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