Silurus meridionalis (southern catfish): 124389322
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Entry
124389322 CDS
T08004
Symbol
mtr
Name
(RefSeq) LOW QUALITY PROTEIN: methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00270
Cysteine and methionine metabolism
smeo00450
Selenocompound metabolism
smeo00670
One carbon pool by folate
smeo01100
Metabolic pathways
smeo01230
Biosynthesis of amino acids
smeo04980
Cobalamin transport and metabolism
smeo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
124389322 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124389322 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
124389322 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
124389322 (mtr)
04980 Cobalamin transport and metabolism
124389322 (mtr)
Enzymes [BR:
smeo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
124389322 (mtr)
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GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-GeneID:
124389322
NCBI-ProteinID:
XP_046710643
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Position
7:20939356..20965768
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AA seq
1263 aa
AA seq
DB search
MGPTVQYETGAGAASLEAELREMLQKRIMVLDGGMGTMIQQRNLQDDDFHGQEFKDHPQS
LKGNNDLLSITKPEVIYSIHKTYLLAGADIIETNTFSSTRVAQADYGLEKLAYRLNKVSA
ELARKAADEVSAETGVKRYVAGAVGPTNRTLSVSPSVERPDFRNITFDELVEAYSEQVQG
LLDGGCDILLVETVFDTANAKAALFAIDKLFEESYEPRPIFISGTIVDKSGRTLSGQTGE
AFVISVSHVKPLCIGLNCALGASEMRPFIETIGKSTEAFIICYPNAGLPNTFGGYDETPE
CTATHLKEFATDGLVNIVGGCCGTTPDHIRAIAESVKHCQPRVPPTDLFSNYMLLSGLEP
FRIGPYTNFVNIGERCNVAGSRKFAKLIMGGNYEEALSIAKAQVESGAQVLDINMDEGML
DGPVAMARFCKLIASEPDIAKVPLCIDSSNFAVIEAGLKCCQGKCIVNSISLKEGEEAFL
KRAREVHRYGAAVVIMAFDEEGQATEIDQKVKICTRAYHLLTKKVGFNPNDIIFDPNILT
IGTGMEEHNLYAINFIKTIRIIKETLPGARISGGLSNLSFSFRGMEVIREAIHGAFLYHA
IKDGMDMGIVNAGSLPVYDDIDKELLRLCENLIWNRDPEATDKLLQYAQNNAKGVKKVIQ
TDEWRKGSVEERLEYALVKGIEKYVVEDTEEARVQTDRYSRPLRIIEGPLMNGMKTVGDL
FGAGKMFLPQVIKSARVMKKAVAHLIPFMEKEREEMKAALGVSEDLDPYQGTIILATVKG
DVHDIGKNIVGVVLGCNNFRVIDLGVMIPCDQILKMAIEKKADIIGLSGLITPSLDEMIF
VAKEMERLGMKTPLLIGGATTSKTHTAVKIAPRYTAPVVHVLDASRSVVVCSQLLDEXFK
XGFLEEITEEYEDIRQDHYDSLKDRRYMSLEQARKKCLHIDWLSQPPPDQPQFLGTCVFD
AYNLRKLVDFIDWKPFFDVWQLXGKYPNRGYPKIFNDKTVGEEARRVFDDALKLLNRLID
CKDLQARGVVGFWRAQSHGDDILVYPDDVTPTLSNHTATFFGLRQQAEKDSVSSEPYLCL
ADFVAPLESGVRDYIGLFAVAVFGAEKLSQGFVQQGDDYSSIMVKALADRLAEAFAEELH
ARVRKEFWGYSEEGDLLSSDLHKLRYSGIRPAPGYPSQPDHTEKHTMWRLAQIQEKTGIG
LTESLAMTPAAAVSGLYFSNPKSTYFAVGKITKEQVEDYARRKEISVSEAEKWLAPILAY
DTD
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgacagttcagtatgagacaggtgctggagcagcttctctcgaggctgagctc
agagagatgctgcagaaaaggatcatggtcctggatggtggaatgggaaccatgattcaa
cagaggaacttgcaggatgacgacttccatggtcaggagtttaaagatcacccacaaagc
ttaaagggcaacaatgacctgctgagcatcaccaagcctgaggttatctactcaatccat
aagacatacctgcttgccggagcggatatcatcgagacgaacacgttcagcagtacacga
gttgctcaggcggattacgggctcgaaaagctggcctatcggcttaacaaggtgtcagca
gaattggcccgaaaggctgctgatgaagtttctgctgagacaggtgtgaaacgctacgtg
gctggagcagtagggccgaccaacagaactctctctgtctcaccatctgtggaaagacca
gacttcagaaacatcacatttgacgaactggtcgaggcgtactcagagcaggtccaaggg
ctgctcgatggaggctgtgatatcctgctggtggaaaccgtctttgatacggcgaatgca
aaggctgctctgtttgctatcgataaactgtttgaggaatcctatgaaccaagacccata
tttatctctgggactatagtggacaagagtgggagaactctctcagggcagactggagag
gcttttgtcatcagcgtatctcatgtaaagcctctctgcattggtctgaattgtgctctg
ggagcctctgaaatgaggccgtttatcgaaacgatcggaaagagcactgaggctttcatc
atatgttaccccaacgcaggcctccccaacacatttggtgggtatgatgaaaccccagaa
tgcactgctacacatttaaaggagtttgcgacagacggtttggtgaacatcgtcggaggc
tgctgcggaacgacgccagaccacatacgggcgatcgctgagagtgtgaaacactgccag
cccagagttcctccgacagacctgttcagcaattacatgctgctctctggtctggagcca
tttcggatcggaccgtacactaacttcgttaacatcggcgagcgctgtaacgtggccgga
tcacgcaagttcgccaaactcatcatgggtgggaattatgaggaggcgttgagtatagct
aaagcccaggtggaaagcggtgctcaggtgctggatatcaacatggatgaggggatgctg
gatggccccgttgctatggctcgcttctgcaaactcattgcatccgagccagacatcgcc
aaagtgccgctgtgtatcgactcctctaactttgcagtgattgaagcaggtctgaagtgc
tgccagggcaagtgcatcgtcaacagcatcagcctcaaggagggagaagaggcctttctc
aaacgcgcccgggaagtgcatcgctacggggctgctgtcgtcattatggccttcgatgag
gaggggcaggctactgaaattgatcagaaggtcaagatctgcacaagagcgtatcatctc
ctgaccaaaaaggtgggctttaaccccaacgacatcattttcgaccccaacatcctgacc
atcggcaccgggatggaggaacacaacttgtacgcgatcaacttcatcaaaacgattcgg
atcataaaggaaactttgcctggagcccggatcagtggaggtctatctaacttgtccttc
tcattccgaggcatggaggtcatcagagaggccatacacggagcgtttctctaccacgct
attaaggacgggatggacatggggattgtgaatgcaggctcactgcctgtctatgatgac
atcgataaagagctgctccggctgtgcgagaacctcatctggaaccgggacccagaggcc
acagataagctccttcagtatgctcagaacaatgccaaaggagtgaagaaggtaattcag
acagatgagtggagaaaaggaagcgtggaagagagactggagtatgcacttgttaagggt
atagagaagtatgtagtggaggacacagaggaggctcgtgttcagacagatcgctattcc
cgaccactccgcatcatcgaggggccacttatgaatggcatgaagaccgtaggagatctg
tttggtgccggaaagatgtttctgccacaggtgatcaaatcagcccgtgtgatgaagaag
gccgtagcgcatttgattccctttatggagaaagagagggaggagatgaaggctgcactt
ggagtgtctgaggacttggatccttatcagggcacgatcattctggccacagtaaaggga
gacgtccatgacatcggcaagaacattgtgggtgttgtgctgggatgcaacaactttcgg
gtgattgatttaggagtgatgattccatgtgatcagatcctgaagatggccattgagaag
aaagcagatatcatcggtttgtcgggtctcatcacgccgtcccttgacgagatgattttt
gtagctaaggaaatggaacgcctgggcatgaaaacccctctgctgatcggaggagccacg
acttcaaagactcacacggcagtaaagattgcccctcgatacaccgctcctgttgtacac
gttcttgatgcgtctcgtagtgttgtcgtgtgttctcagttgttggatgaantgttcaaa
tgaggatttcttgaggaaataacagaggagtatgaagatatcaggcaggatcactacgac
tctcttaaggataggcgatacatgtctctcgagcaggcacgaaagaagtgcctgcacatc
gattggctctcacagccaccaccagatcaaccacagttcctgggcacgtgtgtgtttgac
gcttataacctgaggaagctggtggacttcatcgactggaagccattctttgacgtgtgg
cagctgnaggggaaatatcccaatcgcgggtaccccaaaatctttaatgataaaactgtg
ggagaagaagccaggcgtgtgtttgacgatgctctgaagcttctgaaccggctgattgac
tgtaaggacctgcaagcaagaggcgttgtgggcttctggcgtgcacaaagccacggagat
gacattcttgtataccctgatgatgtcactccaaccttatctaaccacactgctaccttc
ttcgggcttagacagcaggcagagaaggactcggtgagttcggagccgtacctgtgcctg
gcagatttcgtagcgccgctggaaagcggagtgcgggactacatcgggctcttcgcggtc
gctgttttcggggccgaaaagctcagccaaggttttgtgcagcagggcgatgattacagc
agcatcatggtgaaagctcttgctgacagactggctgaggcctttgctgaggagctccat
gcccgtgtgagaaaggagttttggggttacagtgaagaaggagatctgctgtccagtgac
ctccacaagctgcgttactctggcattcgtcctgctccaggctaccccagccagcctgac
catactgagaaacataccatgtggagactcgcccaaattcaagagaaaaccggtattggt
ctgactgagtcacttgccatgactccagctgcagcagtatccggtctctacttctccaac
cccaaatccacctactttgctgtgggcaagatcaccaaagagcaggtggaagattatgcc
aggaggaaggagatttctgtgtctgaggcagagaaatggctggcacctatcctggcttat
gacaccgactaa
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