Silurus meridionalis (southern catfish): 124389640
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Entry
124389640 CDS
T08004
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124389640 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124389640 (babam2)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124389640 (babam2)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124389640 (babam2)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124389640 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
124389640 (babam2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
124389640 (babam2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
124389640 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
124389640
NCBI-ProteinID:
XP_046710998
LinkDB
All DBs
Position
8:complement(21438959..21535522)
Genome browser
AA seq
386 aa
AA seq
DB search
MNSLSPELALSRMSPELRPLLCTVVRNGRVGLDSTNCLRITDLKSGCTSLTPGPCCDRFK
LHIPYAGETLKWDIIFNARDPELPPDFIFGEDAEFLPEPSELPHLVAWDADDPECLLQLV
KELLQQYHQYQCQRLKDSSRLLFEYDSLLEDPNYGRSMEIYAGRKNSWTGEFSARFLLKL
PVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLFLSPSIEHALGGPSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHRRREYIAAFLSHFGMGVVEYDAVGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFSSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFANGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctttctccagagctggccctgagccggatgtctcccgagctgaggccgtta
ctttgcactgttgtacgcaacggccgtgtcggtttagattccaccaactgcctgcggatc
accgaccttaaatctggttgcacatctctgactccagggccatgctgtgacagatttaaa
ctgcacatcccatatgctggagagactctgaaatgggacatcatctttaacgcccgagac
cccgagctgcctcccgactttattttcggagaggatgccgagttcttgccggagccttcc
gagttaccgcacctggtggcctgggatgctgacgaccccgagtgcctgctgcagctggtg
aaggagctcctgcagcagtaccaccagtaccagtgccagaggctaaaagacagctcacgt
ctgctcttcgagtacgacagcctgctcgaggaccccaactatggccgcagcatggagatc
tacgctggacgcaagaacagctggacaggcgagttctctgctcgctttctgctcaaactc
ccagtggacttcagcaacatacccatctatctcctcaaggacacggcactggaccctgga
gaagacgtagctctgttgtctgttagtttcgaagatgccgaggcgactcaggtcttcccc
aaactcttcttatctcccagcatagagcacgctcttggaggaccctcagccctgcatatt
ccagcctttccaagtggaggctgcctcatcgactatgtgcctcaagtgtgccagttactg
acaaataaggtacagtatgtaatccagggctatcacaggaggagggaatacatcgctgct
tttctcagtcattttggaatgggggtcgtcgagtacgatgctgtaggcttcaccaagctc
acacttctactcatgtggaaagacttctgcttcctagtgcacgtggacctgccgctgtat
ttcccacgagaccagcccactctgacctttcagtctgtgtaccacttcagcagcagcggg
cagctctactcgcaggtgcagaagtcgtatccgtatagtccacgctgggacggcaacgag
atggccaagagagcgaaggcgtacttcaagagcttcatccctcagtttcaggagggagcg
tttgccaacggaaagctttaa
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