Silurus meridionalis (southern catfish): 124389808
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Entry
124389808 CDS
T08004
Symbol
iars2
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124389808 (iars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smeo01007
]
124389808 (iars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124389808 (iars2)
Enzymes [BR:
smeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
124389808 (iars2)
Amino acid related enzymes [BR:
smeo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124389808 (iars2)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124389808 (iars2)
Prokaryotic type
Other AARSs
124389808 (iars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
124389808
NCBI-ProteinID:
XP_046711265
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All DBs
Position
8:complement(27988275..28000282)
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AA seq
1025 aa
AA seq
DB search
MFLCRVSALAGRRWGQAVGLGQGLGARRVAVFRAALSFSSAGDAAAAPGSGAQTPAEYRH
TVLLPRTHFPMKLSGQKLLDVELQIQRDCGFEQLYTWQRERKSKKEFCLHDGPPYANGDA
HVGHALNKILKDVHNRFEMLRGRKVSYVPGWDCHGLPIELKALGELDTKDLSPLQIRQKA
REYAESAIARQRAAFQRWGIMADWENSYYTFNGTYEAAQLRVFQEMHSKGLIYQDYKPVF
WSPSSRTALAEAELEYNPEHVSTAVYATFPLNTLPPKLTTMMGELQGKVCVLVWTTQPWT
IPANQAVCFMPKAQYSLVKRGDDEQLLLVATERIANLSSILGTELQNLATFTGSDLDGGI
CRHPTIPEKEVPLLPANHVTMAKGTGLVHTAPAHGMEDYSVASHFSLPVECIVDEEGRFT
EAAGADLQGLSVLEDGTSTVISMLRTAGALIKEEPCVHSYPYDWRSKKPVVIRASKQWFI
NTASLKDTAKEVLQKVRVMPESARASLLAMLDRRTYWCISRQRSWGVPIPVFYHKHTGEP
LINKYTVSHIASVFAEKGSDSWWVEPLETLLPPDVLKKSKAGAVTDYVRGEDVLDIWFDS
GTSWAAVLQAGEKDADTGKRGWLKVQDADPRADVYIEGKDQIGGWFQSSLLTSVAVRNKA
PYRALVVHGFVLSEKGEKMSKSLGNVVDPNVVINGGTDLAVSPPYGADVLRWWVAESNVF
SEVQIGPKALNTARENINKLRNTLRFLLGNLNGFDPRIHAVDSKDMHYIDQYLLHLLRDF
SIKVTDAYSEFDCGRVIRLLQAFITRDLSSFYFSIIKDRLYCDGENSLGRRSCQTVLEEI
LDGVTRSIAPILPHLAEEVYQHAPGHDEGESVFRSGWIKSSSVWRKPGLEEAVEGACAIR
DSFLSSIPGCNAAEYDLTIAIEPGLFFELVESLQEEPTSTCSQLTELMMASRITLTGVLP
RDLPHNAVISKGSFLINLEGGEIREESAYSVAAVPISLSRCPRCRRYTSDTPDCLCPRCQ
TVIAQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtgccgtgtttccgctttagcagggcggaggtgggggcaggcggtggggttg
gggcagggtcttggtgcgcggagagtcgccgtgttccgggccgctctctcctttagttcc
gccggggacgcagcggccgcccccgggtccggagctcagacacccgcggagtaccgacac
accgtcctgctcccccgcacacacttccccatgaagctcagcgggcagaaacttctggat
gtcgagctacagatacagcgggactgcgggtttgagcagctctacacgtggcaaagagag
agaaaatccaagaaggagttctgtctccacgacgggccgccctatgccaacggagacgcc
catgtcggccacgccctcaacaagatcctgaaggatgttcacaatcgctttgagatgctg
cgaggaaggaaggtgagctacgtccccggctgggattgccacggtcttcccatcgagctc
aaagccctgggagaactcgacaccaaagacctgagtcctctacagatccgacagaaagct
cgggagtacgcggaatccgccatcgcgaggcagcgtgcagcgttccagcgctggggcatc
atggccgactgggagaacagttactacacgtttaacggaacatacgaggcggcgcagctc
cgcgtcttccaggagatgcacagcaagggtttgatttatcaggattataaacccgtcttc
tggtctccatcatccaggacagcgttagcagaagcagagctggagtataaccccgagcac
gtgagcactgcagtgtacgctacgttccctctcaacacactcccacctaaactaaccaca
atgatgggggagttgcagggtaaagtgtgtgtgctggtgtggacaacgcaaccatggact
attccagccaaccaggcagtgtgtttcatgcccaaagcacagtactctttagtgaagaga
ggtgatgatgaacagctcctcctggtggcgactgagcgcattgcaaacctcagcagtata
ctcggcactgaactacaaaacctggctacattcacgggctctgatctggacggtggaatt
tgccggcatcccacaattcctgaaaaggaagttcccctgttgccggctaatcacgtgact
atggctaaaggaaccggattggtccatacggctcctgctcacggcatggaggactacagc
gtggcctctcacttcagcctgcccgtggagtgtatagtggatgaagagggcaggttcaca
gaggcagccggtgctgatctgcagggtctgagtgtcctggaggacggaacatctacagtg
atctcgatgctccgtaccgctggagctttaattaaagaggagccgtgtgtacacagttac
ccgtacgactggcgcagtaagaagcccgtggtgatccgagctagcaagcagtggttcatc
aacacggccagcctgaaggacacggctaaggaggtgctgcagaaggtgcgtgtgatgcca
gagtcggcccgggcgagtctcctggcgatgctggacagaaggacgtactggtgtatatca
cgtcagaggagctggggagttcccatccctgtgttctaccacaaacacactggggaacct
ctcatcaacaagtacaccgtgtctcacatcgccagtgtgtttgcagagaaaggaagtgac
agctggtgggtggagccactggaaacactacttcctcctgacgtactgaagaagagtaaa
gccggagctgtgacggattacgtgcggggtgaggacgtgttggacatctggtttgacagt
gggacgtcctgggctgctgtgctacaggcgggtgagaaagatgctgacacaggaaaaagg
ggctggttaaaagtacaagacgcagacccgagggcagacgtgtacatcgaggggaaggat
cagatcggaggctggttccagtcgtctctgctgaccagcgtggctgtgcgcaacaaagca
ccttacagggcgttagtggtccatggatttgtgctcagtgagaaaggagagaaaatgtcc
aagtctctgggtaacgttgtcgaccccaacgtcgtcattaacggaggaacggatctggca
gtttctcctccgtacggtgcagatgttttgaggtggtgggtcgcagagtctaacgttttc
tctgaggtccagattggacccaaagcactgaacacagccagagagaacatcaacaagctg
aggaacactctgaggttcttgctggggaacctaaatggttttgaccctcgcattcatgct
gtagactccaaagacatgcactacatcgaccagtacctactgcacctgctgcgagacttc
agcattaaggtaactgatgcctacagtgagtttgactgcggccgagtgattcgtctcctg
caggccttcatcacccgagacctgagcagcttctacttcagcatcatcaaagacaggctg
tactgtgatggggagaactctctgggcaggaggtcatgtcagactgtgctggaggagatt
ttggatggcgtgactcgctccatcgctccgatcctccctcacctggccgaggaggtgtac
cagcacgcgccggggcacgatgaaggagagagtgtgttccggagtggatggattaagagc
agctctgtgtggaggaaacccgggttggaggaagccgtagagggggcgtgcgccatcaga
gactccttcctgtcttccatcccaggatgcaacgcggcagagtatgacctgaccatcgcc
attgaacccgggctcttcttcgagctcgtggagtccctgcaggaggaaccgacctctaca
tgttctcagctgacggagctgatgatggcgtcacgtatcaccctgacaggcgtgctgccc
cgagaccttccccacaacgcagtcatcagtaaggggagcttcctcatcaatctggaaggt
ggcgagatccgtgaagaaagtgcgtactctgtagctgccgttcccatctctctgtcccgc
tgcccccggtgtcgacgctacacctcggacacgcccgactgcctgtgcccgcggtgccag
acggtcatcgcccaataa
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