Silurus meridionalis (southern catfish): 124390136
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Entry
124390136 CDS
T08004
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124390136 (exd2)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
124390136 (exd2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124390136 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
124390136
NCBI-ProteinID:
XP_046711835
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All DBs
Position
8:15204323..15212141
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AA seq
631 aa
AA seq
DB search
MSKQSTLTAAVATLLGATLGGLFLWRSIYKQKKKSLKVPKDTHLLPVERLGPLELSSNAV
HHSKQELTPPSIAQTAKCLSLPSIEKLLEVPAVVVNSSDEFEEFWPMFQRDLSVFPVLGL
DCEWVKSMRVSIKGKACAVSLLQMATYSGHCMLVRLLAFRDAQLPLPKGLLEVLKDSHVL
KVGVGCYEDGKRLASDHGLSLVCTVDLRYLALRQRHAVLNNGLSLKSLAGDLLNVTLDKS
LELRCSNWEAENLSQEQRSYAARDAQVSVSLFLYLLGLYSGPCLLTEEEISFSKLSGHCQ
GLVDVPFRWRGEGEEGERRRRSRRSTVDSPESGDQQVPDPRRNKRKPLGVGYSARKSPLY
DNCFLHAPDGQPLCTCDKKKAKWYLDKGIGELVSEKPFIVRLLFEPSGRPESQKDYYLTA
KENVCVVCGKVESYIRKNIVPHEYRRHFPAEMKDHNSHDILLLCTSCHAASNVYDGFLKQ
QLADEFSAPQGCEEGVRLLEDSDRRRVRSAARALLSTSNSMPPSRREELLSVVRAYFCKE
EEEKEVSEELLHTAANLETRIFNESYVPHGLKVVQAYAEQGLRGLIDLERRWRQHFLSSM
QPNFLPPLWSVDHNHEKYLRKFGENLLINLS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacagagtactctcactgcagcagtagcaacattgttaggagccacgcttgga
ggactgttcttatggcgtagtatatataaacaaaagaaaaaatctctcaaagtcccaaag
gacactcatctattgcctgtggagcgacttggacctctggaattgagcagcaatgctgtt
catcattcaaaacaagagctcacgccaccatcaatagcacaaacagccaaatgtctatca
ctaccatccattgagaagttacttgaggtgccagcggtggtggtgaactcatcagacgag
tttgaagaattctggcccatgttccagagggacctgtctgtctttcctgtcctgggcttg
gactgtgaatgggtaaagagcatgcgtgtgtccatcaaaggcaaagcatgtgccgtgtct
ttgctgcaaatggctacgtattcgggtcactgtatgctggtcagactgctggcattccgc
gatgcccagctgcctcttcccaaaggtctgctggaggtactgaaagactctcacgtgctg
aaggtaggcgtcggctgctatgaagatggcaaacgcctggccagtgaccacggcctgtcc
ctcgtgtgcacagtggacttgcgctacttggcacttagacaaagacatgcagtgctaaac
aatgggctgagtttaaagtccctggctggagacctgctcaatgtcaccctggataaatcc
ctggagctgcgctgtagtaactgggaagctgaaaacctgagtcaggagcagaggtcatat
gcagcacgtgatgcccaggtttcggtctctctgtttctttacctgctgggactctattct
ggtccgtgcctgctgaccgaggaggagatatccttctcaaagttgtctggccactgtcag
ggcctggtggatgtgcccttcaggtggcgtggtgaaggtgaagagggggaacgcagacgt
cggtcccgcaggtctactgtggacagtccggagtctggtgatcagcaagtgccagaccca
cgaaggaacaagcggaaacctcttggagttggatattcagccaggaaatctcccttgtat
gacaactgcttccttcatgcccctgatggtcagccactttgtacatgtgacaagaaaaag
gcaaagtggtaccttgacaaaggaataggagagctggttagtgaaaagcccttcatcgtg
cgcttgctgtttgagccctcgggtcgccctgaatctcagaaggactattaccttacggcc
aaagaaaatgtctgtgtggtgtgtggcaaagtggagtcttacatcagaaagaacattgtt
ccacatgagtacagacgccacttccctgctgagatgaaggatcacaattctcatgacatc
ctgctgctgtgcacttcctgtcacgctgcgtctaacgtgtatgatggcttcctaaagcag
cagctggcagatgagttctccgccccacagggctgtgaggagggtgtaaggttgctggag
gactcggatcggcggcgggtacggtctgctgcccgtgcccttctcagtaccagcaacagc
atgcccccgtccagacgagaagagctcctttcagttgttcgtgcgtacttctgcaaagaa
gaagaggagaaggaagtctcagaagaactgctgcacacagctgccaacctggagactagg
atctttaatgagagctatgtgccacatggtctgaaggtggtacaagcgtacgctgagcaa
ggactgcgtggtctgattgacttggagcggcgctggcgtcagcacttcctgtccagcatg
cagcccaacttcctccctccactctggtccgtggaccataaccatgagaaatacctgcgc
aagttcggagagaacctgctcattaatctgtcttga
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