Silurus meridionalis (southern catfish): 124390499
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Entry
124390499 CDS
T08004
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124390499 (bcl11ba)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124390499 (bcl11ba)
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Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
CCHC_BCL-11A
zf-H2C2_2
zf-C2H2_16
zf-H2C2_5
zf-C2H2_15
Actin_micro
zf-C2H2_ATbp_2nd
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
124390499
NCBI-ProteinID:
XP_046712431
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All DBs
Position
8:2207362..2259059
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AA seq
819 aa
AA seq
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MPGRAMSRRKQGNPQHLSQREIINTESEHVEADLSLAELAAHHTPMLLDPNMVAPLPPGL
GDHDLLTCGQCQETFPLGHILLFIEHKKKQCHGLAGTHGCYDKMADRSSPSPPRSELRKV
EEPVEIGIQVTPEDEDERLLTPPKGICPKQESGLAGRDEPSSYICTTCKQPFPSAWFLLQ
HTQNTHGIRIYLEPNGSNTSLTPRITLPPPIGAESIPQSPLTNFLGDNNPFHLLRMTGPL
LREPTPGFVENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPM
AMETQSMDFSRRLRELAGNNNSTPPLSPSRANPMHRLLNPNPFQPNRKSPFLNTPPLPPM
PPNSSTPPQTQDKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKR
HMKTHMHKAGSVTGRSDDGLSTTSSPEPGTSDVTGDPMKNRDGDFQGEGLGPDNEEEEED
EEEEELENESRPESNFSMDSEFCRNRENGSKPPNDEKSLSLGKMVDNVGLNSIQQYNNLI
VDNRKRLPFSKRGSDGQRDTGDEDSVVEEMDHVERATVNGRNCGSGDSFSGLFPRKPTPI
TSPSLSNSSKRIKIEKDLDMPPASLIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSP
FATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLSGGPGPGRPSSKESRRS
DTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYR
CDICQMPFSVYSTLEKHMKKWHGEHLMTNEVKIEQAERS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcagggcgatgtcccgtcgcaagcagggaaaccctcagcatctatcacagagg
gagattataaacactgagtctgagcatgtggaagcagacctgtcgctggccgagctggcc
gcccaccacaccccgatgctgctggaccccaacatggtcgcccctctgcctccgggcctc
ggagaccacgacctcctgacttgtggccagtgccaggagaccttcccgttgggccacatc
ctgctctttattgaacacaagaagaagcagtgtcatggcctggccggcactcacggctgc
tatgacaagatggcggaccgcagcagcccctcgcctccacgctccgagctgaggaaggtg
gaggaaccggtcgaaatcggaatccaggtgacacccgaagacgaggacgagaggctgctg
acgcctccgaaaggaatttgcccgaagcaagagagcggcctggcaggtagagatgaacct
tcgagctacatttgtaccacatgcaagcaacccttcccaagcgcctggttccttctgcag
cacacccagaacacccacgggatccgcatctacctggaacccaatggctcaaacacttcg
ctcactccacggatcactcttccacctcctatcggtgctgagtccataccccagtctcct
ctcaccaatttcttaggggacaacaacccctttcatctgctccggatgaccgggccgctg
ctccgagagcccacaccgggcttcgtcgaaaatcgtctcccaaacacccccccctttgtt
agcccccctccacgccaccacctagatccccatcgcctggaacgccttagcgccgaggaa
atgggtttaatttcccagcatcccagtgccttcgagagagtgatgcgcttgacacccatg
gccatggagacccagtccatggatttctcgcgtcgtctgcgagagctagcgggcaacaac
aactccacccctccgctctcacccagtcgtgccaaccctatgcaccgcctcctcaatccc
aacccctttcagccgaaccgcaagtcgccctttctgaacacccctccactgccaccaatg
cccccaaacagcagcacgccaccacagacgcaggacaagagcaaatcttgtgaattctgt
ggaaagaccttcaagttccagagcaacctgatagtgcaccgtcgaagccacacaggagag
aagccttataagtgccagctgtgtgatcatgcctgttctcaggccagcaagctaaagcgc
cacatgaaaacccacatgcacaaagcaggctcggtgacgggtcgctcggatgatggtctc
tctaccacaagttcacctgagccaggcactagtgatgtcacaggggatccgatgaagaac
agggatggtgacttccaaggtgagggactagggccagacaatgaagaagaggaagaggat
gaagaggaagaggagctggagaatgagagtaggcctgaatcaaacttcagtatggactca
gagttctgccgtaacagggagaacggctctaaacccccaaacgatgaaaagagcctctcc
ttgggtaaaatggtagacaatgtggggctgaactcaattcagcagtacaataacttgatt
gttgacaatcgcaaaaggcttcccttctcaaagaggggatctgatggacagagagacacg
ggagatgaggactctgtggtggaggaaatggaccatgtggagcgggccaccgtgaacggc
aggaactgtggctcaggcgattctttctcaggcctcttccctcgcaagcccacccctatc
accagtcccagtctctccaactcctccaaaaggatcaaaatagagaaagacttggacatg
cccccagcatctctaatcccctcagagaacgtctactcccaatggctggtggggtatgca
gcatcacggcacttcatcaaagaccccttcctcggcttcactgattccagacaatcgcca
ttcgccacctcctccgagcactcgtcagaaaacggcagcctgcggttctccacccctcct
ggggacctgctggatgggggcctttctggacgcagtggcactgccagcggtggcagcaca
cctcacctatctggaggcccgggaccaggacgtcctagctcgaaagagagccggcgcagc
gacacgtgtgagttctgtggcaaggttttcaagaactgcagcaacttgacggtgcatcga
cgcagccacacgggcgagaggccctacaagtgcgagctgtgcaactatgcctgcgcgcag
agcagcaagctcacccgccacatgaagacgcacgggcagctcggtaaggaagtgtaccgc
tgtgacatttgccaaatgccctttagcgtctacagcacgctagagaaacacatgaaaaag
tggcatggcgaacatttgatgacgaacgaggtcaaaattgaacaagctgagagaagctaa
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