Silurus meridionalis (southern catfish): 124390523
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Entry
124390523 CDS
T08004
Symbol
asb2b
Name
(RefSeq) LOW QUALITY PROTEIN: ankyrin repeat and SOCS box protein 2b
KO
K10324
ankyrin repeat and SOCS box protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124390523 (asb2b)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
124390523 (asb2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
SOCS_box
Ank_KRIT1
DUF2387
Zn_ribbon_TFIIS
Motif
Other DBs
NCBI-GeneID:
124390523
NCBI-ProteinID:
XP_046712478
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Position
8:19114973..19122033
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AA seq
617 aa
AA seq
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MSLKGICSSGRAAFGCQLKKGVKVGSQMHTFRQKNWMRPTGVKSQRQGSDSGARCEDPSD
VTGAPSHEPIMLAIRRGDVQTVTELATSISCIKTHSAEEDWTALHEAAYHGKAACLKALL
KGKPTSVDKRTLQEQTALLIATNGKHLDCVRCLLEAGADPDISNKNKETPLYKACEKESI
DIVKVILAFGGSVNQRCHRGWTALHEAATRGNTQLCEILLQARAVIDATNAYGITPLIQA
ARHGRTNIVNFLISKGAGVNLQSCEGTTALSEACKHGHTDTVEFLLRHHADANKGSKTGL
LPVHFAAQHGHEEIVSLLLPVTSRSKLRQSGITPLHLAAEFNKENVVKFLIKSGCDVNAM
LSRERSSMFHDHRSTSLYCAVTAGNGGVVDLLLKAGANPNLDPXSPLLVALRKGCFRTIS
TLVKHGADVNAHVPAHPTDFPGVLLYTHSMEILQYLLDNGCEAQECFRCDHTDTRQTSSQ
SRSEDTGQRTHSIMGEIFPSQTVCTESTIRNLQFCEWISSVSHMAAPLISLLLDYVGNVR
LCCRVIEQLKSKEEWAAIKVKASSPRPLMHLCRLKVREQVGAQRLTFLNTLPLPGRLLHY
LYCSQDSNTEYTVLNLG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaaaaggtatttgtagctcaggcagggcagcttttggttgtcaactcaaaaag
ggagtgaaagtgggttctcagatgcacacatttagacagaagaactggatgagaccaact
ggagtgaagagtcagcggcagggttctgacagcggcgcacggtgcgaggatccctctgac
gtcacgggagcaccatcacatgagcccataatgctggcaataaggagaggtgatgtacag
acagtgactgaacttgcaacatcaatatcatgcatcaaaacccacagtgcagaagaagac
tggacagccctacatgaagcagcataccatgggaaagctgcctgtttaaaagctctgctt
aaaggtaaacccacttcagtagataagcgcactctccaggagcaaactgctcttctaatt
gcaactaatgggaagcacctggactgtgtgaggtgtcttctggaggcaggtgcagaccca
gatatcagcaataaaaacaaagagacaccactttataaagcttgtgaaaaagagagcatt
gatatagtgaaggtgatcctggcatttggaggttcagtaaaccagcgctgccatcgtggc
tggaccgctctccatgaagcagcgacacggggaaacacacagctctgtgagattctccta
caagccagagctgtcattgatgccaccaatgcttatggcatcacgccactcatacaggca
gctcggcatgggcggacaaatattgtgaacttcctcattagtaaaggtgctggtgtgaac
ctacaatcatgtgaagggactacggctctaagtgaagcctgtaaacatggccatacagac
acagtggagtttttgctcagacaccatgcagatgcaaacaaaggctccaaaactggactt
ctgcctgtgcactttgctgcccagcatggccatgaagagattgtgtccttactgctgcct
gtcactagccgttcaaagttacgacaaagtggcatcactcctcttcatctagcagctgag
ttcaacaaggaaaatgttgtaaaatttttgattaagtcaggctgtgatgtgaacgcaatg
ctgtcccgtgaacgctcatccatgtttcatgatcaccgcagcacatctctgtactgtgct
gttacagctggtaatggaggagttgtggacttgttgctcaaagctggtgcaaaccccaac
ttggaccccntcagcccacttctagtcgccctacgcaaaggctgttttaggactatatcc
acactggtgaaacatggtgcagatgttaatgctcatgtaccagctcatcccactgatttt
ccaggagtgctgttgtatacccatagcatggagattttacagtatttgctggacaatgga
tgtgaggcacaggagtgtttcaggtgtgaccatacagacaccaggcaaacttcaagccaa
agcagaagtgaggacactggccagaggactcactcaataatgggagaaatatttccatcg
caaacagtttgtacagaatcaacaatcagaaatcttcagttttgtgagtggatttcctct
gtgagccatatggctgcacctttgatcagcttgctgctagattatgttggaaatgtccga
ttgtgttgtagagtcattgaacaattaaaaagcaaagaagagtgggctgcaattaaggta
aaagcatcatctcctcgtccactgatgcatctgtgcagactgaaggttcgtgagcaagtt
ggtgcccaaagactgacatttttaaatactcttccactaccaggcagattgctccactat
ctgtactgttcacaggacagcaatactgaatatacagtccttaacctcgggtga
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