Silurus meridionalis (southern catfish): 124390891
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Entry
124390891 CDS
T08004
Symbol
socs7
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124390891 (socs7)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
124390891 (socs7)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
124390891
NCBI-ProteinID:
XP_046712940
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Position
9:complement(25850918..25859503)
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AA seq
786 aa
AA seq
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MNTGQEMSPDFVLMRLVSAAEEDRLDDESSSLSPGSGLGHGNVKAKLDCSQNLAGLSHLS
AGNKALQSGGSDAPDAGVMATGAPLSVPPPPLHASEARAYDLSHRGGIGPQLLVFRNISR
DPDGLSKNRADDSLDSRSLEEQTTHTSESSGSATNNTRGAVDAQHQYHPPWALHPQLRVN
TEDTDRGELCHRHRDWQQIGDTSKPSTKAQGEHRIPDRPVLELARQFGELGVAPVPDFLL
KDGDLPHCSCSTTTGIRQGEDPTETSDALLVLEGLDSEVNGLGMKSNTESQDGAQVKAEL
ALKCFPSGQAVGVTSGLCLPTCRDSHLCCLLRGSITIKTQGDTTDRDSAQFPTSSQSSSS
VELRPEGSSSNLGSSTSMQALRSVGAACEPFKGLKVPTKSRKGSLKNRLSKLFRTKSCSG
SNNLLDKRPSVTFSISSAGSLVDMSAGEQDASSQPGLTRAQSAFSGAAFTPVFTGETVSL
LDVDISQRGRNSPHPPTPPPPPRRSLSLLDDIGGPQPGPFLVNIMGASLQSLPLPLPPPP
PIHATIQHSLSLNDAFFRALPHSALSPIETPPPMRVAPPSNVCPLRGVDSSSFTASLREL
ERCGWYWGPMNWEDAELKLKGKPDGSFLVRDSSDPRYILSLSFRSQGVTHHTRMEHYRGT
FSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQLLYPVSRFCNV
KTLQHLCRFCIRQLVRIDHIQELPLPKPLISYLKKFYYYDPEEEMYLSIKGMRQIAGVEQ
EPESET
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgggcaggaaatgtcacccgattttgtcctgatgcgcctggtctctgcggcc
gaggaggaccgtttggacgatgagagcagcagtctgtcgccgggctctggactgggacat
gggaacgttaaggctaaactggactgctcgcagaatctggcgggtctcagtcacctctca
gcggggaacaaagctctgcagtctggcggaagcgatgcacctgacgccggcgtaatggct
accggagcaccgctctccgttcctcctcctccgctccatgcctccgaggcccgcgcttac
gatctcagccacagaggcggaatcgggcctcagttgctggtattccgaaatatctcaaga
gaccccgatggattgtccaaaaacagggcggatgacagccttgattcgaggtctttagaa
gagcagacgacgcacacttccgagtcgagcggcagcgcaaccaacaatacgcgcggcgct
gtagatgctcagcatcaataccatcctccatgggcgctgcatcctcagctcagagtgaac
accgaggacacggacagaggagagctgtgccaccggcatcgcgactggcagcagatcggt
gacacatcaaaaccgagcacaaaggcgcaaggagagcaccggatcccggacaggcctgta
ctggaactcgctcgtcagtttggggagctaggggtcgccccggttcccgactttcttctc
aaggatggtgatctaccccactgctcgtgctccacgacgactggaattcgacaaggcgaa
gatccaaccgagaccagcgatgctctgcttgtactcgagggcctcgactcggaggtcaac
ggtttgggcatgaagagcaacaccgagtcccaggatggagcccaggtgaaggcagagctc
gcactgaaatgtttcccttctggccaggcggtcggggtcaccagtggtctgtgcttaccg
acatgtcgcgactcgcatctttgctgtttgcttcgaggctccatcactattaagactcaa
ggcgacaccactgacagagactcagcacagttcccgacttcatcacaatcttcatcttca
gtagaactgcgtcctgaaggctcgagctccaatctcgggtcgagcaccagcatgcaggcg
ctgaggagcgtcggtgcggcctgcgaaccgtttaaagggctgaaagtgccaaccaagagc
agaaagggatctctaaaaaaccgtctgagcaaacttttcaggactaaaagctgtagcggc
tctaataaccttctggataagagaccatcggtgaccttctccatctcctcagccggcagc
ttggtggacatgtccgcaggggagcaggatgcgagcagccaaccaggattaacaagggcc
caaagtgccttctctggtgctgcattcactcctgtcttcactggagagacagtgtcactg
ctggatgtggacatctcacagagagggagaaactctcctcatcccccaactcctcctcca
cctccacgcagaagtctcagcctgctagatgatataggtggacctcagccagggcctttc
cttgtgaatattatgggggcttccctgcagtcccttcccttgcctcttcctcctcctccc
cccatccatgccactatacagcatagcctcagcctcaatgacgctttcttccgagctctc
cctcattccgctctgtcaccgattgagactccacctccgatgagagttgctccaccttca
aatgtgtgtcctctgagaggagttgattccagcagcttcacagcgagcctgagggaactg
gagaggtgtggctggtactgggggccgatgaactgggaagacgcagaactgaaactgaaa
gggaaaccggatggatcttttctggtgcgagacagctcagaccccagatacatcctcagc
ctgagtttccgctcccaaggagttacacaccacacacgcatggagcattacagagggacc
ttcagcttgtggtgccatccaaagtttgaggaccgctgccattcggtagtggagttcatc
gagcgcgccattatgcattcgaagaacggaaaattcctttactttctgcgctcgcgtgta
cctggactccctccaaccccagtgcagctgctgtacccggtctcccgcttctgtaacgtc
aaaaccctgcagcacctctgccgcttctgcatccgccagcttgtccgcatcgaccacatc
caggagcttcctctcccaaaacccctgatttcctatttgaaaaagttctactactacgac
ccagaggaagagatgtacctgtcaatcaaaggcatgcgacagatagcaggtgtggagcaa
gagcccgagtcggagacgtag
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