Silurus meridionalis (southern catfish): 124391133
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Entry
124391133 CDS
T08004
Symbol
gli2b
Name
(RefSeq) zinc finger protein GLI2b
KO
K16798
zinc finger protein GLI2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124391133 (gli2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124391133 (gli2b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124391133 (gli2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
124391133
NCBI-ProteinID:
XP_046713468
LinkDB
All DBs
Position
9:complement(11852603..11926464)
Genome browser
AA seq
1482 aa
AA seq
DB search
METSVPTAAEKKECKTAGLDAHGFSELPKKPSPTLLSRGPHHIFPTFHTPIPIDIRHHEG
RYHYEPHGLHPLHGAPALGNPVISDISLIRLSPGGPAESPFSPPHPYVSPHMEHYLRSVH
GSPTLSMISAARGLSPAEVTHEHLKERGLFSLPPPPPGANSADYYHLMASHRSPYGDLIA
AGSTTAAAAAAAAAAAAAAVHLPDYINPMDMSRFPSPRLTPRLTRKRALSISPLSDASID
LQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFPFHHSINPMAYQQLLSQQR
GLSPFGHTPPLIQPSHTFSSRQHILTSSGLSASTHNEAETKNTSSDSAVSSTVNLHSKRS
KVKLELDNSRPLSPCSPDPSPPVDPKEDVDRDEGKQEPEVAYETNCHWEGCSKEYDSQEQ
LVHHINNEHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKA
YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTK
RYTDPSSLRKHVKTVHGPEAHVTKKQRGDLVPRPQPPPRENGENEGGTKQTGRGGQEKFE
ANSTTRGVEDYLQVKSIKTENSVMYQSSPGGQSSCSSQPSPLGSATHHDGGIELSGRGGS
MGDLSMLDDVPLVDSTVSTGTLGLHLRRSASPTRKLNHLKQEKLKTVRESCSWANAIPQA
PDTKLPRIPINGSLLESSGHLGNIPVPITSLRLSDICPGETTVLCQPVERRDSLASTVSS
AYTLSRRSSGISPCNSSRRSSQASQASIRLNNISSADSYDPISTDLSRRSSEASQFGGLS
GLLSLTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRIALLGDSHETAMHPLGLPTM
PRRCSDTEYPTTSMMPHEVPGGITRRASDPVRRVAVDQQHILKGQRFSSMSNVNSNPPPY
FPSSSRYLSVQSHVHSDGSLHRLQYPPRPPSISENTAMETSDMDGTINGIADDMMLPDDM
VRYLTSNGDSTQHNGSGYRHQQAQGFLGNGAPPPQSCYYQRRMAVVDGTANSIVPQTSAS
CHNSPAQQHMSPSVNKSHMPVQWNEVSSGTVEASPSQIKQTQSLDWVNVTGLQQKQGSIQ
NLKSNQQVRPMSQNLAHAAQQSSMQRSEVMAQRMNCSQTLKQQGNKNNQNEHINNHVYNQ
ESGINRNTSQHASCSNITGGNVGLTSPSKKPVQPMHMQNNRVRTKPGASQSHVNFENNQG
DYSHMSGDQHSYDTLFQNPILNGNHGVLQPRPPTEPKPFSRQHSGPNAMTTQQPAYPQSH
FSPEYDTSEASPKNPASVGVSETDSSVMFYTGHIHKFEANSLKMHDTTEAVNHGTDNVTM
AAVSSPGTNQVSSTVDSSSGVDQTQIDFDAILDDGDHSSLISGTLSPSILRSLSQNSSRL
TTPRNSVTLPPVPAGIGNMAIGDMTSMLTALAEESKFLNMMS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagtgtccccacagctgctgagaaaaaagagtgcaaaacagctggactggat
gcccatggtttcagcgaactgcccaaaaagccctcaccgaccctccttagcagagggcct
catcatatattcccgactttccacacaccaatccccatcgacatacgtcaccatgaagga
agataccactatgaacctcatggccttcaccccttgcatggcgctccagcgttaggaaat
ccagttatctcggatatatccctgatccggctttcaccaggtggcccggccgagtcgcct
ttcagcccccctcacccctacgtttcaccccatatggagcactacctgcgttcagtccat
ggcagcccaaccctttccatgatctcagcagcccgtgggcttagccctgcagaagtcacc
catgagcacctgaaggagcgtgggctatttagtcttcctcctccccctcctggagccaac
tcagctgattactaccacctgatggcgagtcacaggagtccatatggagatctgattgca
gctggatccaccactgctgctgctgccgctgctgccgccgccgcagccgctgctgctgtt
cacctcccagactacatcaacccaatggacatgtcgcgcttccccagtccacgcctaaca
cccaggcttacccggaagagagctttgtccatctctccgctttcggacgccagtattgac
ctacagactatgatccgcacttctcctaactctctagtggcctacatcaacaactcacgc
tccagctcagctgctagcagctcatacggccatctttctgtcggcggcattagcccttca
tttcctttccatcattccatcaacccaatggcatatcaacagctgctgtctcagcagaga
ggcctgagcccttttggacacacacctcccctcattcagccttctcacaccttctcctct
cgacaacatatactcaccagctcgggactgagtgctagcacacataatgaagcagagact
aagaacacgagcagtgactcggcagtcagcagcacagtaaacctgcatagcaaaaggtca
aaggttaagttggagttggacaactcacgacctctctcaccttgctcaccggatccgtca
ccaccagtcgacccaaaagaggatgtggacagagacgagggaaagcaggagccggaggtg
gcgtatgagacaaactgccactgggaaggctgcagcaaagagtacgacagccaagagcag
ctggtccatcacatcaataacgagcacatccatggggagaagaaagagtttgtgtgtcgc
tgggaggagtgctccagagagcagaagccctttaaggcccagtacatgctggtggtgcac
atgcgcagacacacgggagagaagccacacaagtgtacttttgaaggctgctcaaaggca
tattcacgtttagagaacctgaaaacacaccttcgctcacacactggggaaaaaccttac
gtgtgcgaacatgaaggctgcaacaaggccttttccaatgcctcggaccgggccaagcat
cagaaccgcacacattccaatgagaaaccatatgtttgtaagattccgggttgcaccaag
cggtacacagacccaagctctctacgcaaacatgtcaaaactgtgcatggcccagaagca
catgttaccaagaaacagcgtggagacctggtgccccgacctcagcccccaccacgagag
aatggagagaacgaaggaggaaccaaacaaactggccggggaggacaagaaaagtttgag
gccaacagtaccactagaggcgtggaggactacctacaggtcaaatcaataaaaacagag
aactctgtgatgtatcagtccagccctggtggtcaatcatcatgtagcagccagccgtca
ccgcttggcagtgccacccaccatgacggtggaatagagttgtcgggccgcgggggcagc
atgggagacctgagcatgctggatgacgtccccctggtggactcaaccgtctccacgggc
acactgggcctccacctgcgcaggagtgccagtcccactcgcaagctgaaccatttgaag
caagaaaagctgaagacagtgagggagtcgtgctcctgggcaaatgctattccacaagct
cctgacaccaagctaccacgaattcccatcaatggctccttactggagagctctggacat
ttaggcaatattcctgtgcccatcaccagccttcgtttgagtgacatttgccctggtgag
acaacagttctgtgccagccagtggagcgtcgagacagtctggcaagtacagtgagttca
gcttatacgctaagccgccgctcctcaggcatttctccctgcaactccagccgtcgctcc
agccaggcctcacaggccagcatccgcctaaacaacatcagctcagccgactcatatgac
cccatctctacagacctgtcacgccgctctagtgaggccagccagttcggaggcctgtca
ggccttctcagcctcaccccagcccagcactatcgacttaaagccaaatatgctgcagca
acaggtggcgctccacccacccctttgcccaacatggatcgcatgagcctgaggacacgg
atagccttgttgggagattcacatgaaacagctatgcacccacttggcctccccacaatg
cccaggagatgcagtgacacagagtatcctactactagcatgatgcctcacgaagtacca
ggtggtataacacggcgggctagtgatccagttagacgtgtggctgttgatcagcaacat
attctgaaggggcagcgttttagcagcatgagcaatgtgaattctaatccaccaccatac
tttccctcatcaagtcgctacttgtcagtgcagagccatgtccactctgatggtagtctc
catcgccttcagtaccctcctcggccacccagcatctcggagaacactgcgatggagact
agcgatatggatggtacaatcaatggtattgctgacgacatgatgttacctgatgatatg
gttcggtacctcacttctaatggagattctacacaacacaatgggtctgggtaccggcac
cagcaagcgcagggcttcctagggaatggtgcaccaccacctcaatcatgttattaccag
aggcgcatggctgtagtggatggcactgcaaacagcatagtgccacagacatcagcttct
tgccataatagtccagcacaacagcacatgtctcccagtgtcaacaaaagtcacatgcct
gtacagtggaatgaggtcagctcagggacagtggaggcatctcccagccaaatcaagcaa
acacaatctttggattgggtaaatgtaactggtctccagcaaaagcaaggctctatccag
aacctcaaatccaaccaacaagtaagacccatgagtcagaaccttgcacatgctgcccaa
cagagttctatgcagcggagtgaggttatggcccaaaggatgaactgtagccaaactcta
aaacagcaaggcaacaagaataatcagaatgagcatattaataatcatgtatacaaccaa
gaaagtggcataaacagaaacaccagccagcatgcgtcttgcagtaatattacaggaggc
aatgtcggtttgacaagcccatctaaaaaaccagtgcagcccatgcacatgcagaataac
agggtaagaactaagccaggggccagtcaaagccatgtaaattttgagaataatcaagga
gattattcccatatgagcggtgatcagcatagctatgatactcttttccagaatcctatc
ctaaacggaaaccatggtgtactccagccaaggccgcccacagaacctaaacccttctcc
aggcagcactcagggccaaatgcaatgacaacacagcaacccgcttacccacaatcgcac
ttcagcccagaatatgacacctctgaagctagccccaagaatcctgccagtgttggtgtt
agtgaaaccgacagcagcgtcatgttttatacaggacatatccacaagtttgaggccaat
agtctaaaaatgcatgatacaacagaagctgtaaaccatggcacagataacgtaacaatg
gctgctgtcagctccccagggaccaatcaagtctcaagcacagtggactcctccagtgga
gtagatcagacccagattgactttgatgccatactggatgatggcgaccactccagtctc
atatcaggaactctaagtcctagtatcctccgcagcctgtctcaaaattcctcccgcctc
actacaccccggaactctgtaacattgcctccggtaccagcaggaattggcaacatggcc
attggagatatgacctccatgttgactgctctggcagaagagagcaagtttcttaacatg
atgtcttaa
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integrated database retrieval system