Silurus meridionalis (southern catfish): 124393144
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Entry
124393144 CDS
T08004
Symbol
vdrb
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124393144 (vdrb)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124393144 (vdrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124393144 (vdrb)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124393144 (vdrb)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124393144 (vdrb)
Nuclear receptors [BR:
smeo03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
124393144 (vdrb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
124393144
NCBI-ProteinID:
XP_046716547
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Position
1:34285697..34322145
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AA seq
424 aa
AA seq
DB search
MQRNSVMESTVSTSTQVPDEYDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRK
ASFTCPFSGSCSITKDNRRHCQSCRLKRCLDIGMMKEFILTDEEVKRKKDLIQKRKDEEA
QKVAQKPHLSDEQSAIISSLVEAHHKTYDDSYSDFTRFRPPVRQGPVTRSASRAASLHSL
SDASSDSFRHSPESGDGKLNLSSMLMMYQEQGSSPDSKEDEGSRLSMLPHLADLVSYSIQ
KVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWCCGGEFKYCVNDV
TKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHERVEVLQERIS
EVLQAYIRVHHRGRLLYAKMIQKLAELRSLSEEHSKQYRTLSFQPEHSMQLTPLVLEVFG
GQVT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaactcggtgatggagtccacagttagcacgtccacgcaggtgcctgatgaa
tacgaccgcaacgttccacggatctgcggcgtgtgtggagacaaagctaccggcttccac
tttaatgccatgacctgtgaaggctgcaagggcttcttcagacgcagcatgaagcgcaag
gccagcttcacgtgcccattcagcgggagctgcagcatcactaaagacaaccggcgtcac
tgccagtcctgcagactcaagcgctgtctggatattggcatgatgaaggagtttatcctg
actgatgaggaggtgaagaggaagaaagatctgatccagaaaaggaaggacgaggaggcg
cagaaggtggcgcagaagccccacctctctgatgagcagagtgcgatcatctcctcgctg
gtggaggctcatcataaaacctacgacgactcgtactccgatttcacccgctttcgacct
ccagtgagacagggtcctgttacacgcagtgccagtcgagccgcttcactacactcgctg
tctgatgcttcttccgattcttttcgccactcacctgagtcgggtgatgggaagttgaat
ctgagcagtatgttgatgatgtatcaggaacagggttctagtcctgactctaaggaggac
gagggttcgcgtttgtccatgctccctcacctggctgatctggtcagctacagcatccag
aaggtcatcggattcgccaagatgatccccggattcagagagttgacggcggaggatcag
atcgctttgctgaagtctagtgctattgaggtgatcatgctgaggtccaatcagtccttc
agtctagaggatatgagctggtgttgtgggggggagttcaagtactgcgttaatgatgta
actaaagctggccacactctggagctgctggagccgctggtgaagttccaggtggggttg
aagaagctgaatctgcacgaggaggagcatgtgttgctgatggccatctgcctgctgtcc
cccgaccgtcccggcgtgcaggatcacgagcgtgttgaggttctacaggagcgtatctca
gaggtcctccaggcgtacatccgagtgcaccaccgcggccgtctgctttacgctaagatg
atccagaagctggcggagctgcgcagcctgagtgaggagcactcaaagcagtaccgcaca
ctgtccttccaacccgagcacagcatgcagctcacgccgctcgtcctcgaggtgttcgga
ggacaggtcacctag
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