KEGG   Silurus meridionalis (southern catfish): 124393518
Entry
124393518         CDS       T08004                                 
Symbol
kdm6bb
Name
(RefSeq) lysine (K)-specific demethylase 6B, b
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124393518 (kdm6bb)
Enzymes [BR:smeo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     124393518 (kdm6bb)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124393518 (kdm6bb)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL
Other DBs
NCBI-GeneID: 124393518
NCBI-ProteinID: XP_046717368
LinkDB
Position
11:complement(4966395..4987022)
AA seq 1755 aa
MYHTEHQYSGRYSWDSFVPVSSSRASWAPSSSRHMPPSSRGSGGGYQSTLNHASGRNYHK
AYNNRPPEFSRHRDHDHPRERGPNVRDRVTSWSWGSNQHQNLDRATMNGYSSGCGGRVPS
YQPPRYGGPHQQHRTADRWSPVSSSRSFQCLSLKRPPPRNPSPTRDECPSKRSKNGSSHQ
ALSSKIKHPMPMNHPPLSHLPRTCSPPYRGDAQWSQSNKRQSALGFQESSQSYSRDHLHR
IHSVPSSTLGSPGQDFHSSKSLKLGHLHSYNHQTHDHLGPHGTKGDWERSVPPSPANFTR
VPYSPQHQPPEGTHRHPVPHGSRGSPTPSWKDKQRSETRCSGLETEERLQGLKEGGRHHS
TPKHTQLHCNSEGRSVRHGTTGGRASLSPSPKPESSSQRLEGKKIRVSKHRSPSNYTKPS
YSNSGGQESPNRLQDTDMLKHVEIKKRHRARERRQERKREEGADERKARILRKLEAKKKK
KERQEKKSHRERKGSHRKIEIQSERKIKDERKRSRKAERKCFKKVEKDYLRREMSPQSPS
SDSLSKSLDSTILASPPPLASLETSLCIHKYTKHEEEGSTFDSDTSHTSGLVSPSTPPLA
NQNHVLQYQSTDNADNISTTNDNSLPPFELKSPKTSSFGTQNMQFDEEDITPEQEFSLLN
SSSGFDKKVPQSEEKNQHAPDLLPAHSSSIEDHLRLDPSASPPVLSWQGSPVSDLSEEEE
DEAGANIDGVIRRPVLQPSPTHSSPIQDPEEIWKESGPLSLEYRHSDLAKLFGIAQPFKV
VEEQEEKEPMAEQQDSSTTASQGLHLHDNDGTLASDSHNYTYRGGPFGRPPPKTTAGVKY
SSSLSLDPEICPPEQHSPTSTSPRALSPVAVPLINLSPSISTSDLSKPDNNMQVTEDKEE
DSLVEKEGHAMTETVESLNEPSCTSVMKENEVKVLPSNFLPATLQAKLAHSCEVLLNHSS
TTFLSSEVNSGKIKSKTKLEKNKQGQDTDKKKGKQKNQKTRAGSRGTTEEASVRRQHIKQ
KRNTKTEKEQYSSSGEHSKQRAKVHNKVIAKKKLTKTEEDQRKGNKEKAKAKEEDIDRDA
GMKKTTSRTPPTVRLLSSVPLKELKIQLVKLKIRGRQTFTASEFEQKTILLKEISINNNA
TDIIRACKYAKVQGRFRESYLLPSLSVKPVLNIDFQIPREKLNPPTPSIYLESKRDAFSP
VLLQFCTDPKNPVTVIRGLAGSLRLNLGLFSTKSLVEANADHAVEVRTQVQQPADENWNT
CGSAQTWPCESSRSHTTISKYAQYQASSFQESLQEEKDSEDEEEAEKKTESMSEMPSSNP
SCTQSTEQKSVGKIIKFGTNIDLSDPKRWKLQLQELLKLPVFMRVSSTENMLSHVGHTIL
GMNTVQLYMKVPAAEHQEKDSEDEEEAEKKTESMSEMPSSNPSCTQSTEQKSVGKIIKFG
TNIDLSDPKRWKLQLQELLKLPVFMRVSSTENMLSHVGHTILGMNTVQLYMKVPGSRTPG
HQENNNFCSVNINIGPGDCEWFAVHEHYWEAISHFCEKNGVDYLTGSWWPVLEDLYRSNI
PVYRFIQRPGDLVWINAGTVHWVQAVGWCNNIAWNVGPLNSYQYQLALERFEWNEVKKVK
SIVPMIHVSWNVARTVKITDQNTYKMMRHCLLQSIKHIQIMREQLVAEGKKICYQSRVKD
EPAYYCNECDVEVFNLLFVTSENSSRKTYVVHCEDCARRRSSNLSGVVVLEQYSIEDLMN
TYDNFSLAPVPCSKA
NT seq 5268 nt   +upstreamnt  +downstreamnt
atgtatcacacagagcaccaatattctggccggtactcatgggactccttcgtccctgtc
agttccagcagggcttcatgggctcccagctccagccgccacatgcccccttcatccaga
ggcagtggtggagggtaccaatcaaccctgaaccatgcatcaggaaggaactatcacaaa
gcttataacaacagacctccggagttcagcaggcacagagaccatgatcaccccagagag
agagggccaaatgtcagagatcgggtcacgtcatggtcatggggttcaaatcaacaccag
aaccttgaccgggccactatgaatggatacagctcaggatgtggaggacgtgttcccagt
tatcagcctccaaggtatggaggccctcaccagcagcatcggacagcagacagatggagt
cccgtctcctcatccagatcctttcaatgtctgtcacttaaacgaccaccccccagaaac
ccctcaccaactagagatgagtgtcccagcaagcggagcaaaaacggcagctcacatcaa
gctctttcctccaaaattaagcaccctatgcctatgaatcaccctcccttgtctcatctt
cctcgcacctgtagccctccataccgtggtgatgcccaatggagtcagtcaaataagaga
caatctgctttaggctttcaggagtcaagtcagtcctacagcagagatcacctccacagg
attcattcagtgccctcatctacacttggtagtcctggccaggattttcacagctctaag
tccctgaaattgggccacctccactcttacaaccaccaaacccacgatcacctaggaccc
catggaaccaaaggggactgggagcgttctgttccaccctcaccagcaaattttaccaga
gtgccttatagcccccagcaccagcctccagagggcacacacaggcatccagtacctcat
ggcagccgtggttcacccacgccatcctggaaggacaagcagagaagtgaaaccaggtgc
tctggtctagaaactgaagagcggctgcaagggctgaaagagggagggcggcatcacagc
actccaaaacacacccagctccattgcaactctgaaggcagaagtgttcgacatggcacc
actggtgggagagcaagcctgtccccaagtcccaaacctgagtctagttcccagaggcta
gagggaaagaaaatcagggtttctaaacacagatctccgtcaaattacactaagcccagc
tactctaacagtggtggccaagagagcccaaatcgtctgcaggacacggacatgttaaaa
catgttgaaatcaagaaaaggcatagagcacgagagagaaggcaagagaggaaaagggag
gagggagcagacgaacgaaaggcaagaatactaagaaaactggaagcaaagaaaaagaaa
aaggagaggcaggagaaaaaaagccaccgggaaaggaaaggaagccatagaaaaatagag
atacagtctgagagaaaaataaaagatgaaagaaaaagatcaagaaaagcagagagaaaa
tgttttaagaaagtggagaaagactatttaagaagagaaatgtctccccagagcccttct
agtgattcactgagtaaaagtctggactcaaccattcttgcatctcctccacctctagct
tctttagaaacatcactgtgtattcacaaatacacaaaacatgaagaagaggggtccacc
tttgactctgacacttcacacacctcagggttagtttcaccctccactccccctctagca
aatcaaaaccatgtgcttcaatatcaatcaacagacaatgcagataacatatccacaaca
aatgacaacagtctgccaccatttgagcttaaaagtccaaaaaccagcagttttgggact
caaaacatgcagtttgacgaggaggacattacgcctgaacaagagttctcactgttgaat
agctctagtggctttgataaaaaagttcctcagtctgaggaaaagaatcaacatgctcca
gatctgctacctgctcacagcagttctatagaggaccatctccgtctggatccctcagct
agcccccctgtacttagctggcagggctcccctgtgtcagatctcagcgaggaagaagag
gatgaagcaggggcaaacatagatggagtgatcaggagaccagtgctccagccaagcccc
actcattcctctccaatccaagatccagaggaaatctggaaagaatcaggtcccttgagt
ctggaataccgccacagcgacctggccaaactattcggcattgctcagccttttaaagtt
gtggaggaacaagaagagaaagaacccatggcagagcagcaagacagtagcacaacagcc
tctcagggactgcatctgcatgacaatgatggcaccttggcctcagacagccataactat
acctacagaggtggcccctttggtcggccacctcctaagacaacggctggggtcaaatac
tcttcctcgctctcactggatccagaaatatgccctccagagcagcacagcccaacctca
acatccccaagagctctgtctccagtggccgtgcccttgatcaacctttccccttccata
tctacctcagacctttcaaagcctgacaacaacatgcaggtgactgaagataaagaagag
gatagccttgttgagaaagagggtcatgccatgactgaaactgtagaatcattaaatgaa
ccaagctgcacctctgtgatgaaagagaatgaagtcaaggtgttgccctccaactttttg
cctgctaccttgcaggcaaaactggcacacagctgtgaggtgttgctaaaccacagctcc
actaccttcctttcatcagaagtgaacagtggaaagataaaatctaaaaccaaactggag
aaaaataagcaagggcaagacacagacaaaaagaaagggaagcaaaagaatcagaaaaca
agagctggcagcaggggaacaacagaagaggcaagtgtcagaagacagcatataaagcag
aaaaggaacaccaaaactgagaaagagcagtactcgtcaagtggtgaacattctaaacaa
cgtgccaaggtccacaacaaagttatagcaaaaaagaaactaacaaagacagaggaggac
caaagaaaggggaataaggagaaagcaaaagctaaagaggaggacattgacagagatgca
ggaatgaaaaaaacaacctccaggacacctccaactgttcggctactgtcctctgtaccg
ctgaaagagctaaagattcagttggtgaaactcaagatcagagggaggcagacattcact
gcctctgagttcgagcaaaagacaatcctgctgaaagagattagcatcaacaacaatgca
acagatataattagagcctgcaaatatgcgaaagtgcagggtcgttttcgtgagtcctat
ctccttccctctttgtctgtgaagcctgtgctgaacatagattttcagattcccagagag
aagcttaacccacccacgcccagcatttatctcgaaagtaagagagatgcattctctcca
gtgctgctccagttctgcacggatcccaaaaacccggttactgttatccgaggtttggca
ggatcactccgtctcaacctgggtttgttctccactaagtcactggttgaggcaaatgcc
gatcatgctgtggaagtgaggactcaggtgcagcagccggctgatgagaactggaacacg
tgcggctcagctcagacgtggccatgtgagagcagccgatcacacaccaccatctccaag
tatgctcagtaccaggcctccagcttccaagagagcctacaggaagagaaggacagcgag
gatgaggaggaagcagagaaaaaaacagaatctatgtcagagatgccatccagcaaccct
tcctgtacacagagcacagaacagaagtcggtcggcaaaatcatcaagtttggtacaaac
attgacctttctgacccaaagaggtggaagttgcagctgcaggagttgttgaagttgccc
gtgttcatgcgcgtctcctccacggagaacatgctgagccacgtcggacacaccatactt
ggcatgaacaccgtccagctgtacatgaaagtcccggcagccgaacaccaggagaaggac
agcgaggatgaggaggaagcagagaaaaaaacagaatctatgtcagagatgccatccagc
aacccttcctgtacacagagcacagaacagaagtcggtcggcaaaatcatcaagtttggt
acaaacattgacctttctgacccaaagaggtggaagttgcagctgcaggagttgttgaag
ttgcccgtgttcatgcgcgtctcctccacggagaacatgctgagccacgtcggacacacc
atacttggcatgaacaccgtccagctgtacatgaaagtcccgggcagccgaacaccagga
catcaagaaaacaacaatttctgctctgtgaacattaacattggccctggagactgtgag
tggtttgctgtacatgagcattactgggaagccatcagtcacttctgtgagaagaatgga
gtggactatctaacaggttcatggtggccagttctggaagatctgtatcgctccaacatc
cctgtctatcgatttattcagcgtcccggagatttggtgtggattaatgcaggaaccgtt
cactgggttcaggccgtcggctggtgcaacaacatcgcctggaacgtgggtcctctaaac
tcttatcagtatcagctggctctggagcgctttgagtggaatgaagtcaagaaggtcaaa
tcaattgttcccatgattcatgtctcctggaatgtcgcccgtacagtcaagatcaccgac
caaaacacttacaaaatgatgagacattgtctcctgcagtccataaaacacatccagatc
atgagagaacagctcgtagcagaagggaagaagatctgttaccagagccgagtgaaggac
gagccggcctactactgcaacgagtgtgacgtggaggtgtttaacctgctctttgtcacc
agcgagaacagcagtaggaagacctatgtagtgcactgcgaggactgtgctcggcggagg
agctccaaccttagcggagtcgtcgtgctcgaacagtacagcattgaggacctgatgaac
acttatgataacttcagcttggctcccgtaccgtgttcaaaagcctga

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