Silurus meridionalis (southern catfish): 124393734
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Entry
124393734 CDS
T08004
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124393734 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124393734 (trim37)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124393734 (trim37)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124393734 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
HlyD_2
zf-C3HC4_2
LAMB1
BORCS6
Motif
Other DBs
NCBI-GeneID:
124393734
NCBI-ProteinID:
XP_046717701
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All DBs
Position
11:complement(22857573..22871689)
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AA seq
962 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVNKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVDHQLRSCSKSELILK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASNDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLILRYQVRSPTFFQKCRDQYWYIS
QLEAAQSSYIQQINNLKERLAIELFRRQNSRSSSPPDHRMCQPTSSTSTTASGRDSRPGK
STTVEDGSLVNGDQTKEEEEEEEEKTQHDDSNELSDGDLEVDCLTGDEDVNPLDGSSTSG
SSTATSNTEENDIDEENMSGENDVEYSGNMDLEEGEIPDDVIGATGGSSAGIRGSRRNAA
GATASLLEIDPVILIQLLDLKENSHVESLWGIQPRPPASLIPSHAALVSARKERERRSQP
VRRSAPDSAVLTRLKAQMAEVRSKMADVKGQLEARAGVSDARVAPLCSVLDHNASTDPET
AARRKPRELDLLFKAPGTSKHGRHGSKKAVSPKQDVGGAVGGVSLRRNGEAGEKELRGAA
GDALEPSLCPREGPSTAEISVKAQSAHTSPLSLSGFSENQPKPDESLYGAAGSETFNLPA
LNTTPPAGSKLRRPTGSTAALLTDASLDFEHDCSGDIHQSLLSLTEPTSSSSHPEEGLLC
QKPSAHLLPGMSSDSEVECDTENENEDEVGVLEDGEVLTLPCSGEQLMPDDLSFVTGETT
ER
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagagcgtcgagagtatagcggaggtgttccgctgcttcatttgtatggag
aagctgcgagatgctcgtctctgcccacactgctccaaactctgctgcttcagctgcata
cggcgttggctgacagaacaaagggcacagtgtccacactgtcgagctccgttacagctg
cgggagctggtgaattgccgctgggccgaggaggtcacacagcagctggacacactgcag
ctctgtaatctctccaaacatgaagaaaatgataaagacaaatgtgaaaaccaccatgag
aagttgagtgtgttttgctggacctgcaagaaatgcatctgtcatcagtgtgcactgtgg
ggaggcatgcacggaggacacacgttcaagcccctggctgagatttacgagcagcatgtg
aacaaggtgaacgaggaggtggccaaactgcgacgtcgtctcatggagctcatcagcctc
gtccaggaagtggagaagaatgtggaggcggtgcgaggggcgaaggacgagcgagtgcga
gagattaggaacgctgtagagatgatgatcgcacggctggacaatcagctcaagaacaaa
ctcatcacactcatgggtcaaaagacgtccctcacacaggagacagagctgctcgagtct
ctactgcaggaagtggatcaccagctgcgctcttgcagtaagagtgagctgatcttgaag
agcccagagatcctgctcatgttccagcaggttcacaggaagcccatgcagtcattcgta
actacgcctgtaccacctgacttcaccagtgagctggttcctgcttatgactcgagcact
ttcgttctggcaaacttcagtacactgagacagagagcagacccagtgtatagccctcca
ctccaggtgtcaggattgtgctggaggctgaaggtttaccctgatggtaacggcgttgtt
cgtggaaactacctttccgttttcctggagctgtcagctggcctgcctgagacctccaag
tatgagtaccgtgtagagatggtgcatcaggcttccaatgacccgaccaagaacatcatc
cgcgagtttgcatcagacttcgaggtgggcgagtgctggggctacaaccgcttcttcagg
ttggatcttctcgctagtgaggggtatctcaacatgcagaccgacacactcatcctgagg
tatcaggtgagatcacccaccttctttcagaagtgccgtgatcaatactggtacatcagc
caactggaggcggcgcagtccagctacatccaacagatcaacaacctgaaggagaggctg
gccatcgaacttttccggcgacagaattctcggagctcgtccccacccgatcatcgcatg
tgccagcccacatccagcaccagtaccactgcttcgggccgagactcccgccctgggaag
agcactacggtagaggacgggtcactggtgaacggggaccagacaaaggaggaggaggaa
gaggaagaagaaaagacgcagcatgatgactcaaatgagctgtctgacggtgacctggag
gtggactgtctgaccggagatgaggacgtgaaccctctggacggcagcagcacatccggc
agctccacggccaccagcaacacggaggagaacgacatcgacgaggagaacatgtctgga
gagaatgatgtggagtacagtggaaacatggacctggaggaaggagaaattcctgatgat
gttataggagctacaggaggctccagcgcaggaatccggggttcaaggaggaatgcagca
ggagccacggccagtctgctggaaatagacccggttatactgatccagctactggacctg
aaagagaacagccatgtggagtctctgtggggaatccagccccggccacctgcctcgctg
atccccagccatgcggctctggtctcggcccgtaaagagcgagagcgtcgttctcagcct
gtgcgtcgttctgccccggactcggccgtcctgacccgactcaaggcacagatggcagag
gttcgcagcaagatggcggacgtaaaggggcagctggaggctcgtgccggagtctctgat
gctcgagtcgctcctctttgctcggttctggatcacaacgcatcaaccgacccggaaaca
gcagcacgacgcaaaccacgagaactggacctgctgtttaaagctccagggacgagcaaa
catggtcgccacggtagcaagaaagctgtctcccccaagcaggatgtgggaggcgcagtg
ggaggagtctccttacgccgaaatggtgaggctggtgagaaagagttgagaggagcagca
ggagatgcgcttgaaccttcgctgtgtcctagagagggaccttccactgctgaaatttca
gtgaaagctcaaagtgcacacacttcgcctctttctctctctggtttctctgagaaccag
cccaaacccgacgagtctctttacggagccgcagggagcgaaacattcaacctgcctgct
ctgaacacgacgccccctgcaggcagcaaactgcgcaggcccaccggcagcactgctgca
ctgctgactgatgcatcattagattttgagcatgactgctctggagacatccaccaatca
ctgctgagtctcacagagccaacatcttcatcctcacaccctgaagaaggcttgttgtgt
cagaagccgtcagcacacctgcttccgggtatgagcagtgacagcgaggtggagtgtgac
accgagaacgagaatgaggacgaggttggagttctggaggatggagaggttcttacactg
ccctgctcaggagagcaactgatgcctgatgatctgagctttgtgactggggagaccact
gagaggtga
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