Silurus meridionalis (southern catfish): 124394122 Help Entry 124394122         CDS       T08004                                  Symbol nphs1 Name (RefSeq) LOW QUALITY PROTEIN: nephrin   KO K24496   nephrin Organism smeo  Silurus meridionalis (southern catfish) Brite KEGG Orthology (KO) [BR:smeo00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:smeo04990]     124394122 (nphs1) Domain-containing proteins not elsewhere classified [BR:smeo04990]  Fibronectin (FN) domain-containing proteins   Fibronectin type III domain-containing proteins    124394122 (nphs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ig_3 I-set C2-set_2 Ig_2 ig V-set fn3 C1-set C2-set_3 Ig_DSCAM-DSCAML_C NDNF Pur_ac_phosph_N Ig_VEGFR-1-like_5th Ig_TMEM132_2nd Motif Other DBs NCBI-GeneID:  124394122 NCBI-ProteinID:  XP_046718162 LinkDB All DBs Position 12:19410491..19557253 Genome browser AA seq 1237 aa AA seqDB search MSVLSLLSAILLLLGEVRGVCGQQAFRTEPKNVTVRAGATALLKCEVLRASGTVQWVKDG LLLGPHRSLPGHPHYTMTGDEKRGQYYLQIEDVGLDDDSPYECQVGRSETSDPIISRTVW INVQIPPSNPSIVLDSEEPWVEGQEYTVTCIAPDAKPAADATLFKDGEELTDTLSFTMPG SEDKLLNTHTEVKIRPHRSDNGQPLLCKVKNPALSKALETTILMTVYFPPQAPVIEGXES EEVNAGTHLRLVCLSYGGNPLATLHWTKNDEVLPTIWEMDTVSHKASSTLVMEVKPEDNK VVLRCESVNQVSRSPMVITRTLTVLFEPSNVELSGSSEAIEGTEVNMCCSTSSSNPPVHI RWWLGFKELNTTSFTITEGENGGMMTTSNLTHTVSREENGLLLTCEAFNKGTRFSSIQTK TLSVYYPPQKVWLDAPSEGTLLRSGMTIQLVCFSSGGNPTGRLTWFKNGKVVQVPSKNIE SERGVSRELLLTLQPSDNLAKYRCDATNEAKKVQSAEIKLQVQYPAVSLKIVVKQKVLRA GQTVRMDCLAGSSNPKVNISWSLGPISLLGEENAVKKSVYGGVSVSSTLSLPLSSHLHGR RLTCQAFSAALSERVNTFHTLNVLFPPEFAEDQASLVEAIEDDFAALPVKVXANPDDISC EWMFRGEKVLRDRDSRYHFSESWGLEIWNVTRRDTGVYTVECSNAEGKNKSNIKLDVHYP PSVKMKADPVNVNIGDTADLFCIADANPVTDNMFSWKWMGEGEIDGLGEMTQDESTGLLT IYKVTRVQAGPYQCTANNGIVPEASVVGQLVVNFAPELQKGAQWRKVASRGDGTTDADVL CQAEGVPRVQFSWAKNGIPLDYNNPRYLEKTVKEGAIHTSTLTVVNVSAALDYAVFTCTA RNSLGEDTFNIQLLSTNYPDPPSDLKLLSVSSNSVTLEWMPGFDGGLIQNFRVRYRWAGS ASYQYVDVFPPRSTVYTVSGLKPSTIYNFSVNAINSIGESSYADRGAVLTVTTLDPDPVP GEPHPEAPEREEGPAIPVYVIVILVGVFLVCNAFGFFLLVRWKKGRILKEGAGSFSGGKR SDEGSSVSSREPINVSAHRTLLINTSSDPDSSSSVYESYGGSYHYYYPTEAYSPALYTHL ETPEKLDSRHITNPISHDYEEVRDFGPYQDLFGSNVPHASAQTFGADASGHIPASIYEQD KWFTAADLDPASGVYNSIAYRRRKNSELPFELRGELV NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt atgtctgtgttgtcattgctcagtgctattcttctgctcctcggcgaggtacgaggcgtg tgtgggcagcaggcgttcaggacggagccgaagaacgtgaccgtgagggctggagccacg gctctgctgaagtgtgaagtgctgagggcctcggggaccgtgcagtgggtgaaggatggc ctgcttttggggccacacaggtctctgcccggccacccacactacaccatgactggtgat gagaaaagagggcaatactatctccaaatagaagatgtgggcttggacgatgactccccc tacgaatgccaggtgggacgttccgaaaccagtgatcccatcatctcccgtactgtgtgg atcaatgtgcaaattcctccatcgaatccctctattgttctggactcagaggagccgtgg gtggaaggtcaggagtacacagtgacctgcatcgccccagacgccaaaccggctgctgat gccacgctctttaaagatggagaggagctgacagacacattgtctttcacgatgccaggc tctgaggacaaactcctgaacactcacactgaagttaagatcaggcctcaccgttcggac aatggacaacccctactctgtaaagtgaagaacccagctctcagcaaggccttggaaacg acaatattaatgacagtttactttccaccccaggctccggtgatagaagganttgagagt gaagaggtgaatgccgggacccatctccggttagtctgtctgtcatatggaggaaaccct ttggctacactacactggactaagaatgatgaggtgttgcctactatctgggagatggac actgtctcccataaggccagcagtaccctggtgatggaggtgaagccagaagacaataaa gttgtgctgcgctgcgagagcgttaatcaagtgtcccgatctcccatggtcatcactcgc accctcactgtcctttttgagccctctaatgtggaactaagtggctcctctgaagctata gagggaacagaggtgaatatgtgctgctccacttcttctagcaatccaccggttcatatc cgctggtggcttggcttcaaggagctcaacaccacttcctttactatcactgagggagag aatggagggatgatgacgacatccaacctgactcatactgtatccagggaggaaaatgga ctgctgctcacatgtgaagcatttaataaaggcacacgattctccagcatccaaactaaa accctcagtgtgtactaccctcctcagaaggtttggttagatgccccttcagaaggaact ctcctacgttcaggaatgaccattcaactggtgtgtttttccagtggaggaaaccctaca ggccggttgacctggttcaagaatggtaaagttgtgcaggtgccatcgaagaacatcgaa tccgagcgtggtgtgtcacgagagctccttctcactctccaaccaagcgataatttagct aagtatcgctgcgatgccaccaacgaggccaagaaagtacaatcagctgagattaaactt caggtccaatatcctgcagtaagtttgaagatcgtggtgaagcagaaggtgttgcgggct gggcagaccgtcagaatggactgtctggctggaagcagcaacccaaaagttaacatcagc tggagtctgggccccatcagtctgttaggagaggagaacgctgttaagaagtcggtctat ggtggtgtgtcagtcagcagcaccctatcgctccctctctcttctcatcttcatggcaga agactcacctgtcaggccttcagcgctgcactctcagagcgggtcaacaccttccacacg ctcaacgtcctcttccctcctgagtttgcagaagaccaggcgagtctggtggaggcaata gaggatgactttgccgcccttcctgttaaagtcntcgccaatccagacgatatttcgtgc gagtggatgttccgcggcgagaaggtgcttagagatcgggattctcgttaccatttctca gaatcttggggtttggagatttggaatgtgaccaggcgtgatacaggtgtgtacacagtg gagtgttccaatgctgaaggaaaaaacaaaagcaacatcaaactggacgtccactatccc cccagcgtgaaaatgaaggcagatcctgtgaacgtgaacatcggagacactgcagatctg ttctgcatcgctgatgccaatcctgtgactgacaacatgttttcgtggaagtggatgggt gaaggtgaaattgacgggctaggtgaaatgactcaggatgaatcaactggacttttgacc atctacaaggtgacccgagttcaagcaggtccctaccagtgcactgcaaacaatggcata gtacccgaagccagtgtggtgggacagcttgttgtaaactttgctccggagctgcaaaag ggggcacaatggagaaaagtggcaagtcgaggagatggtactactgatgctgatgtgctt tgtcaggctgaaggagtgcctcgtgtccagttcagctgggcaaagaacggcataccactg gactataacaacccacgatatctcgagaagacagtaaaagaaggagccatacacaccagc actctgactgtagtaaatgtgagtgccgctctggactatgctgtgtttacctgcaccgcc cgaaacagccttggagaagacacatttaacatccaacttcttagcaccaattacccagac cccccctcagacctgaagctcctcagcgtctcctcgaactccgtcactctggagtggatg cccggcttcgacggagggcttattcaaaatttccgagtcaggtaccggtgggcagggtct gccagttaccagtacgtcgatgtttttcccccaagatccaccgtgtacacagtgagcggc ttgaaaccttcgaccatctacaacttttcagttaacgcaattaattcgattggagaaagc agctatgctgatcgcggtgcagtactcacagtcaccacattggatcctgatcctgtgcca ggagaacctcatcccgaagccccagagcgtgaagaaggccccgctataccagtgtatgtc atcgttatcctcgtgggagtcttcctggtgtgcaacgcctttggcttctttctattggtc aggtggaagaagggacggattctgaaagagggagcaggcagcttttcagggggcaagagg agcgatgaggggtcatcggtgagcagcagagagccgatcaatgtctcagcacaccggacc cttctcatcaacacgagctcagatccagacagcagcagcagtgtctacgagagctacgga gggagctatcactattactaccccactgaggcctatagtcctgcactttatacccatctg gagacaccggagaagctcgatagcagacacattacgaacccaatcagccatgattacgag gaagtcagggactttgggccgtatcaggatctgtttgggtcgaatgttccacatgcatca gctcaaacttttggagctgatgcatcaggccacattccagcatccatatatgagcaggat aaatggttcactgcagctgatctggacccagcaagtggagtttacaattcaatcgcttac agacgcagaaagaactccgagctgccctttgaactgaggggtgagctggtttaa

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