Silurus meridionalis (southern catfish): 124394622
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Entry
124394622 CDS
T08004
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00515
Mannose type O-glycan biosynthesis
smeo01100
Metabolic pathways
Module
smeo_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
124394622
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124394622
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124394622
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124394622
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124394622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
124394622
NCBI-ProteinID:
XP_046718935
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All DBs
Position
12:5032069..5035983
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AA seq
529 aa
AA seq
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MRISLCQALLTGAIVLNLVILYYVSQAQQRMMEKRRIPGKGFKNANKSVLGMGSSGSIVV
RGKTGDKVAGIKGCMQKNHVTVILREFEHFENYVGDVAQSFLQRMPELCFLVVTDTLPYP
PLTLPADARLIVLSPSPENPPQTHRPENYVQSEFVLLLPDGVDLQHWQQVETLVQELKAE
GNGPVRLVAAPVLARAAVQCLHLQVNLKEWTATYSFGPSGSGGSMCTALYGDAVVLIRTK
DLFNLSVPLARPLMSALFIQTALRGWKIKLLEGPSFTASHRPLFSSSHNQWKADYHLKEA
TNQLMRSFGLKHLVWPDGRDHWFGCSKETPRCFGTVHDDTPEYLYLERWTPPCCLRALRE
TTKHVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCEYLKNLDSG
SLVDANGYVWERAVEGDFYRIQYSEANHLHVDLWPFYSRNGVMTKDTWTDHKQDVEFPEH
FLQPLVPMQFAGINAYGPNNHRAFLELKFGEGVIENPQYPNPIKKSLSS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcagtttgtgccaggccctgctaacaggagccatcgtgctgaacctggtgatc
ctgtattatgtatcccaagcccagcaacggatgatggagaaacgacgcatacctgggaaa
ggctttaaaaatgctaacaaatcagtgttgggtatgggaagttcaggaagcatagtggtg
agaggtaagacaggagacaaggtagcaggcataaagggttgtatgcaaaaaaatcatgtg
actgttatcctgcgagaatttgaacactttgagaactatgtaggagatgtggcccagtcc
tttctgcagcgcatgccagagctctgtttcctggtagtcacagacaccctgccttaccct
cctctgacactgcctgcagatgctcgtttaattgtgctgtccccaagcccagaaaaccct
cctcagacacatcgtccagaaaactatgtgcaatctgaatttgtgctgcttctacccgat
ggtgttgatttacagcattggcagcaagttgagacgcttgttcaagagttaaaagcagag
ggaaatggcccggtgcgcctggttgcagctccagtgctggcacgtgctgctgtccagtgc
ctgcacttacaagtaaacctcaaggagtggacagctacatactcctttggaccatctggg
agtggtggcagtatgtgcactgctttgtatggtgatgctgtagttcttattcgaactaaa
gaccttttcaacctgtcagtcccacttgcacggccactgatgtctgcactgtttattcag
actgcactcagaggctggaagattaagcttctggagggtccttcattcactgcgagccac
aggcccctcttcagttcttcacacaaccagtggaaggcagactatcatctcaaggaggct
accaaccaattaatgagaagctttggccttaagcacttggtatggcctgatgggagggac
cattggtttggctgcagcaaagagacaccacgatgctttggtacagtgcatgatgataca
ccggagtacctctatttggagcgatggactccaccctgctgtttgcgtgccctaagggaa
acaactaagcatgttatcaatattctggagagttctggtgtgcgctactggttagaaggg
ggtagtcttttaggagcagccagacatcaagacattataccttgggactatgatgttgat
ttgggtatttatttggaagacgtgcccaattgtgaataccttaagaacttggattcaggg
tcactggtggatgccaatggttatgtatgggagagggcagtagagggagacttctaccgt
attcagtacagtgaggccaatcacctgcatgtggatctatggcctttctattctcggaat
ggagtgatgaccaaggacacatggactgatcacaagcaggatgtggagtttcctgagcac
ttcctgcagccactggtgcccatgcagtttgctggtatcaatgcttatggaccaaacaac
caccgtgccttcctggagctcaagtttggggagggggtaattgagaaccctcagtatcct
aatcctattaaaaagagtttgtctagttag
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