Silurus meridionalis (southern catfish): 124394698
Help
Entry
124394698 CDS
T08004
Symbol
mmp13b
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124394698 (mmp13b)
Peptidases and inhibitors [BR:
smeo01002
]
Metallo peptidases
Family M10
124394698 (mmp13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_4
Reprolysin_5
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
124394698
NCBI-ProteinID:
XP_046719055
LinkDB
All DBs
Position
12:complement(22016446..22023212)
Genome browser
AA seq
469 aa
AA seq
DB search
MEIIALAVLLVAVGQSFTKPLPTDERERWLLAERYLRRYYGMQPGLLGKSKSSDVMAEKI
RVMQSFFKLEITGKLDDDTLEVMNKARCGVLDVGEYNLFPQKPKWKNTVVTFRITNYTPD
LKKEDVDKAIHNALRTWSLVTPLRFKRLREGNADIMISFGRGEHGDHNPFDGPDGLLAHA
YPPGLGIGGDTHFDEDETWTKDSHAYNLFLVAAHEFGHALGMAHSNDPGSLMFPVYSYAK
GFPLSEDDIKGIQELYGPNPDHEKFKPKPEAPNKCDPELSIDAVTELRGETLIFKDGYFW
RLHPQFTEPELTLIHSIWPQLPKKINAAYENLEKDLVIIFSGIRMWALNGYTLVAGYPKY
IHTLGLPKSIRKIDAAVHIRDTGKTLLFTDEEYWSYNEQSATMDQGYPRSIKDDFPGMQE
RDGDEVDEVDAATYKNGYLYLYHENLQYEYSYNRRKVTRIMRANELLHC
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggagattatagctttagctgtactactagtggctgtgggacagtcattcacaaaaccg
cttcccacagacgagagagagaggtggctgttggcagagcgatacctcagacggtattac
ggcatgcagcccggcctgctgggaaaatccaaatcctcagacgtgatggccgagaagatc
cgtgtcatgcagtcattcttcaagctggaaatcactgggaagttggatgatgacacactt
gaggtcatgaacaaggcgagatgtggtgtcctagatgtaggagagtacaatctcttccct
cagaagcccaaatggaaaaacacagttgtgacattcaggataacaaactacactcctgat
ctgaagaaggaggatgtggataaagccattcataatgccctgaggacctggagccttgtg
actcctctgaggttcaagaggttgcgtgaaggcaacgccgacatcatgatcagctttggg
agaggagaacatggagatcacaaccctttcgacgggcctgatggactcctcgcgcatgct
tacccaccaggattaggcattggtggggacacacacttcgatgaggatgaaacgtggacg
aaagactcgcatgcatacaacctgttcttagttgcggctcacgaattcggccacgctctc
ggcatggctcattctaacgaccctggctcgctgatgttcccggtttactcatacgccaaa
ggattccctctgtctgaagatgacatcaaaggcatacaagaactctacggccccaacccg
gatcatgagaaatttaaacctaaacccgaggctccaaacaaatgcgaccccgagttaagc
atcgatgccgtgaccgagctccgtggagagacgcttattttcaaagacggatatttttgg
cgcttgcacccacagttcactgaacccgaactcacgcttattcattccatatggcctcaa
ctcccaaagaaaataaatgcggcttatgagaaccttgagaaggatctggtcatcatattc
agtggtatcagaatgtgggctctcaacggttacaccctggtggcaggctacccaaaatac
atccacacgctgggactccctaaatccatacgcaaaatcgacgctgcggttcacatccgt
gacacgggcaagactctgctcttcactgacgaggagtactggagttacaatgaacagagt
gccaccatggatcagggataccccaggtctataaaggacgacttccctgggatgcaagag
agagacggggacgaggtggatgaggtggacgctgccacctataaaaatggatacttgtac
ctgtaccatgagaacctgcagtatgagtacagctacaatagacggaaagtcacacgcatc
atgagagcaaatgaactgctgcactgctga
DBGET
integrated database retrieval system
