Silurus meridionalis (southern catfish): 124394943
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Entry
124394943 CDS
T08004
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5
KO
K09337
cone-rod homeobox protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124394943 (otx5)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124394943 (otx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
124394943
NCBI-ProteinID:
XP_046719411
LinkDB
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Position
12:complement(2131631..2136324)
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AA seq
293 aa
AA seq
DB search
MMSYIKQPHYAVNGLTLSGPGMDLLHTTVGYQNTPRKQRRERTTFTRAQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQPKPRPPKKKSSPARETT
SDPANANITANPPYSPVAPPPPAPPTAITPSSTGTNANASVSIWSPASVSPLGDPLCVSS
KTAYAMTYAQTPAYAPAYATSSSYFSGLDCSSYLSPMHAPLSATGSGPLSPIGSSSMALG
QSQVTQGYGPASLGFSTIDCLDYNKEQMAWKLNFGAADCLDYKDQNSWKFQVL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaagcagcctcattacgcagtgaacgggttaacactgtccggcccg
ggcatggaccttctccacaccaccgtcggctaccagaacacaccccggaagcagcggcgt
gagagaactacgttcacacgtgcgcagctcgatgtgctcgaggctctgttcgctaaaacc
cgctatcccgacatcttcatgcgtgaggaggtggcactaaaaatcaacctgcccgagtcc
agagttcaggtctggttcaaaaaccgtcgtgctaaatgccggcagcaacagcaacagagc
agcggacagccgaaacctcggccccccaaaaagaaatcatcccctgcccgagagacgacc
tctgacccagctaatgctaacattactgctaatccgccctacagtccagtggctccgccc
cctcctgccccacctacagccatcactccaagctcaactggcacaaatgccaacgcgagc
gtctctatctggagccctgcgtccgtctcgccattgggtgatccgctctgcgtgtcgagt
aaaacggcctacgccatgacgtacgctcagactccggcctacgccccggcctacgctact
tcctcgtcttatttcagcggcctagactgcagctcgtacctttccccgatgcacgcacca
ctctcagccactgggagtggcccacttagccccataggctcctcctccatggctcttggc
cagtcgcaggtcacgcaaggttatggccccgcctccctcggtttcagcaccatcgattgt
ctggactacaataaagagcaaatggcttggaagctcaacttcggtgcagcggattgcctg
gattacaaggaccagaattcctggaagttccaggtgttatag
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