Silurus meridionalis (southern catfish): 124395153
Help
Entry
124395153 CDS
T08004
Symbol
dntt
Name
(RefSeq) DNA nucleotidylexotransferase isoform X1
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124395153 (dntt)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124395153 (dntt)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
124395153 (dntt)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
124395153 (dntt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
BRCT
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
124395153
NCBI-ProteinID:
XP_046719688
LinkDB
All DBs
Position
2:12328561..12452198
Genome browser
AA seq
514 aa
AA seq
DB search
MFQTTLSSLLRKRRQPELTCAQPQKEMKFGEVTVYLVERRMGKSRRNFLTSLARSKGFCV
DNNLSSNVTHIVAEDNPAHELWPWLQEQGIENLSKMNVLDITWFTQSMRAGRPLPVETEH
WIQGHRVACSDNSGCEKPSVQPEPEAVPPDSPWFTVSQYACKRRTTLHNHNKILTDALEV
LAENYEFIESIGPCLGFRRAASVLKSLPVPLRNISDIERLPCLGPETKAVIQDIFECGSS
SKVEEVLTDERYRTLKIFTSVFGVGPKTAEKWYRKGLRRLEQITFDTSIHLNRMQVAGFQ
HYKDISKPVSKAEAEAVGRIIKEIASSFNGDVTITLTGGFRRGKEFGHDVDFLLTVPGHG
KEDGLLPAVIDQLRSQGILLYSDFQESTFDLSKLPSCRFEAMDHFQKCFLIVKLKNEQVD
GQQAEQTCGRDWKAVRVDLVAPPAERYAFALLGWSGSTQFERDLRRFARLERNMMLDNHA
LFDKTTNTFLQAKTEEDIFTHLGLDYIEPWQRNA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagacaaccctctccagtcttttgaggaaacgtcggcaacctgaattgacctgt
gctcagccacaaaaggaaatgaagtttggagaggtgacggtgtacctggtggagagaaga
atgggcaaaagcaggagaaacttcctgacaagtttggccaggtcaaaaggcttctgtgtg
gacaacaacttaagtagtaacgtgactcacattgtggcagaggacaatccagcacatgag
ctctggccatggttacaggaacagggcattgaaaacctgagcaaaatgaatgtgctggac
atcacctggtttacacagagcatgagagctggcaggccccttcctgtggagacagaacat
tggatacaaggtcatcgtgttgcctgttctgataacagtggatgtgagaagccatctgtg
cagccagagccagaagcagttccaccagacagtccttggtttactgtctctcagtatgca
tgcaaaagacggaccacactgcataatcataacaagatcctcactgatgctctggaagta
ctggcagagaactatgagttcattgagagtataggtccgtgtctgggcttccggagagct
gcatctgtactgaagagtctccctgtgcctctgcgcaacatcagtgacattgagagactt
ccctgcctaggaccagagaccaaggcagttatacaggatatttttgaatgtggatcatcc
tcaaaagttgaagaagtattaacagatgagagatacagaactttgaagattttcaccagt
gtgtttggagttggacctaagacagcagagaaatggtatcgcaaaggcctgcgtagactg
gagcagatcacctttgacaccagcattcacttaaacaggatgcaagtagcaggattccag
cattataaagacatctcaaagccagtaagcaaagctgaggctgaggcagtgggtcgtatt
ataaaggagatcgccagcagtttcaatggtgatgtcactatcactctgactggaggcttc
cgcagaggaaaagaatttgggcatgatgttgattttctccttactgtacctgggcatggt
aaagaagatggacttcttcctgcagtgattgatcaactcaggagtcagggaattctcctt
tactcagacttccaagagtcaacctttgacctaagcaagttgccaagttgccggtttgaa
gccatggatcatttccagaaatgttttctgatcgtgaaattgaagaatgagcaggtggat
ggccagcaggcagagcagacatgtgggagagactggaaggcagtgagggtggatctggta
gcacctccggctgagcgatatgctttcgccctgctgggctggagtggatccacgcagttt
gaaagagacctgaggagatttgcccgactggagcgaaacatgatgctggacaatcatgcc
ctctttgataaaacaacaaataccttcctgcaggctaagacagaggaggacatcttcacc
catttgggattggactatattgagccttggcagaggaatgcttag
DBGET
integrated database retrieval system
