Silurus meridionalis (southern catfish): 124395491
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Entry
124395491 CDS
T08004
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124395491
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124395491
04261 Adrenergic signaling in cardiomyocytes
124395491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124395491
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124395491
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
DUF2201
Cache_3-Cache_2
DAO_C
Motif
Other DBs
NCBI-GeneID:
124395491
NCBI-ProteinID:
XP_046719965
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All DBs
Position
13:complement(7785243..7896896)
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AA seq
1104 aa
AA seq
DB search
MARGMSPGSPLTLLLIVLACSALHGSRASQFPTSLIIKEWVDQMQQELVTLADTASAGKS
LVEIFMKNQKYYTVETNYAGRLVDNAARNIEDFLKKRAKALEALATAAENFQMEHQWTEE
FDENDIVYYNAKDNLETNETEGRKNRIRPEFKEDPAFKNRLISYNHTAVHIPTDIYDGST
IVLNELNWTEALEEVFKKNREEDPTLLWQVFGSATGLARYYPASPWKDARKTPSKIDLYD
VRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVNFNTK
VNNTACFDHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFKQLSDRNVSRANCNKI
IMLFTDGGEERAQEIFKQYNKNKEVRIFTFSVGQHNYDTGPIQWMACDNKGYFYEIPSIG
AIRINTQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSKENGSRI
QHENQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKRRIHNRH
IRLNNKHAITFHENPKFQEPVTLDFLDAELENDIKVEIRTKMIDRVPGEQKKIETLVKSQ
DERYIDRGVRTYTWVPVNGTDYSLALVLPEYNMHYIQANLGDIEQAMWHKVSDTMQVEKF
EDYGYTFIAPREYCQDLKPSTNNIQFLMDVNQYIDKRTPNDPMCNVTLLNRLLLDAGLTA
ELVNLWKKQSVEGVLARFVATDGGITRVYPKSAGEDWTENTETFDSSFYKRSLDNDIYIF
TAPYVNKSRESSYESGILVSKAVELDFNGVKLKPAVVGVKLNVSAWMNSFMNATMKINCK
DEICGCLRNDKHVDCVILDDGGFLLMSNQEEYITQIGQFFGEVDPILMASLLNTSLYAFN
KTYDFQSVCDPEKEPKAAAGPRSAYVPTVADMLSLGWWASTAAWSMLQHFLLSLTFPSFL
HAEEDVSDAYSKESCITEQTQYFFENDNRSFQGVLDCGNCSRMYRAEKLPSTNLVFLITD
AKSTCLSCDTKPVRQAEQPSTGPDPCILAHNPRYRKGPDVCFDNNINEDASDCGGGCSLI
PSLWPVLVLQLLLLWLLTGTGCCS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgggatgagcccgggatcgcccctcacactgctcctcattgtgctcgcgtgc
tcggctttgcacggctcgcgcgcctcgcagttccccacgtcgctcatcataaaagagtgg
gtggatcagatgcagcaggagctggtgacccttgctgacacggctagcgcaggaaaaagc
ctagtggagatctttatgaaaaatcagaaatactacactgtggaaacaaactatgcagga
aggctggtggataatgcagcacggaatatagaggactttttaaagaagcgagcgaaagcc
cttgaggctttggcaactgctgcagaaaacttccagatggagcatcagtggacggaagag
tttgacgagaacgacatagtctattataatgccaaggacaatctggaaaccaacgaaaca
gaaggaaggaaaaaccggattcgaccggaatttaaagaagatccagcctttaaaaaccgt
ctcatctcctacaaccacacggctgtgcacatccctacagacatatatgacggctctaca
attgttttaaatgaactgaactggaccgaagcactggaggaggtgtttaagaaaaacagg
gaggaagacccgacgttactctggcaagtgtttggcagcgctacaggactggctcgctac
taccctgcctctccgtggaaggacgccaggaaaacacccagcaaaattgacctatatgac
gtccgtcgcagaccctggtatgttcagggtgctgcctcaccgaaggacatgctcattctg
gtggacgcgagcgggagtgtgtctggattaactcttaaactcatccgaacgtccgtcagt
gaaatgctggagactctttcggatgatgactatgtcaatgtcgtgaactttaacacaaaa
gtgaacaacacagcatgtttcgaccatctggtccaggccaacgtccgcaataagaagatc
ttgaaagatgcagtgcagaacattacagctaagggcataaccaactacaccaaaggcttt
gagtttgccttcaaacagctctcagataggaacgtgtcgagagcgaactgcaacaaaatc
atcatgctgtttactgatggtggagaggagagagctcaagagatcttcaaacagtacaac
aaaaataaggaggtccgcatcttcaccttctctgttggccaacacaattacgacacagga
cctatacagtggatggcttgtgacaacaaaggctacttctatgaaatcccttctattgga
gcgattcgcataaacacacaggagtatttggacgtcctgggcagacccatggtcctggct
gatgctaaacaggtgcaatggaccaacgtgtacctggatgctttggagctgggtctggtc
atcacaggcactctacccgtcttcaacaaaacgaaatccaaagaaaacggctcacgcatc
cagcatgagaaccagcttattctaggagtcatgggtgtggatgtgtctctggacgatatc
aaaaggctgacaccacgcttcacgatcggccctaatggatattattttgcaatcgatccc
aacggctatgtgctgctccatccgaacctccagcctaagaggaggatacacaatcgtcac
atcagattaaataacaaacatgcaattactttccatgagaatcccaaatttcaggagccg
gtcactctggacttcctggatgctgagttagaaaatgatattaaagtcgagatacgaaca
aagatgatcgacagggtccctggtgagcagaagaagatcgaaaccctggtgaaatctcag
gatgagaggtacattgatcgaggagtgagaacttacacatgggtgccagtcaatggcaca
gactacagtttggccttggttttgcctgagtacaacatgcactacatccaagcaaaccta
ggggacatagagcaagccatgtggcacaaggtctcagatactatgcaggtggagaagttt
gaggattatggctacacgtttatagcacccagagaatattgccaggacctgaaaccctcc
acgaacaacattcaattcctcatggatgtcaaccaatacatcgacaagagaacacccaat
gatccaatgtgtaatgtgactttgctgaacaggttgttactggacgctggtctcacagct
gaactggtcaatctctggaaaaaacagagtgtagaaggtgtgttagccaggtttgtggct
acagatgggggcattacacgggtttaccctaaaagtgctggagaggattggaccgagaat
acagagacctttgattccagtttctacaaacggagtttagacaatgacatttacatcttc
actgccccttatgtcaacaagagcagggagtccagctatgaatctggcattctggtcagt
aaagctgtagaactggacttcaatggagtcaaactcaaaccagctgtggtgggagtcaaa
cttaatgtatctgcctggatgaacagcttcatgaacgccaccatgaagataaattgtaag
gacgagatctgtggctgcctcaggaatgataagcacgtggactgtgtaatcctggatgat
ggaggcttcctgctcatgtccaatcaggaagaatacatcacacagatagggcagtttttt
ggtgaagtggaccccattctgatggccagtctgttgaatacatcactctacgcgtttaat
aaaacctacgactttcagtcagtgtgtgaccctgagaaagaaccaaaagctgctgctggg
ccacgatctgcctatgtgcctaccgtagctgacatgttaagtctgggctggtgggcctcc
actgctgcatggtcaatgcttcagcactttctcctcagtctcacttttccgagttttctc
cacgcagaagaggatgtttcagacgcttactcaaaagagagctgtataacggagcagact
cagtatttttttgagaacgataacaggtctttccaaggtgttctcgactgtggaaactgt
tctagaatgtatcgagctgagaagctgccaagcactaacctggtgtttctgattactgat
gccaagagcacctgcctctcctgtgacaccaagccagtgagacaggctgagcagccttcc
actggtccggacccatgtatactggcccataacccacgctacaggaaaggccccgatgtc
tgctttgataacaacattaatgaagacgcgtctgactgtggcggtggatgtagcttgatt
ccttctctctggccagtgctagttcttcagctgctgctcctctggcttctcactggaacc
ggctgctgctcttga
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