Silurus meridionalis (southern catfish): 124396716
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Entry
124396716 CDS
T08004
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396716
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
124396716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Plk4_PB1
TPR_14
Motif
Other DBs
NCBI-GeneID:
124396716
NCBI-ProteinID:
XP_046721913
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Position
2:complement(16316663..16319639)
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AA seq
848 aa
AA seq
DB search
MTRHVLEQVTDFGDFTRGKELKDFLKQFNSKNSTRSCLANIRISPDGRHIHIIQRAPRTG
LMTHDRYQRAHLAQWQEHQDLVLTRNVSIVDLLYFNQHHSEDEALLLGIIFENGKAEIWK
FAERKRGWSLLQTVELCNSPRAKIVSVCISQNFIIWCEERPPSESLSVSSVDRRHFSYCI
CKRTFDVDERGISLGGVKTALHNNPHYSVTSTGDIVYLLPIIEQDSCTTVNKVFLSWSPQ
TDVYKVHSASNGTLLIRNTAANKQLDFKRLVTDCIGFLSTIIPPDIYGFSPVGHGDILLL
LSSGWVCMMQRDGSLRQIYKLPDNCLTTCGTQNSLNVYDEIVVLTVGRMMYLIDIKCGME
LERIPLKTEGLLFVNCLETHSPQMFTDAGLYTVIQKENEAKSQPSIANLQNINLSAVLVE
AVFEEACKYYQQRSLSTTQLTAEKLKKGGMFQAPITLADIIRNYLGNSKIKPTVKDSSGH
EKLINCLDTELKSLIALEDIKASVVKASEKDLQSYCETLVQQELCRLLSSDIDRENLQYL
NSMFQLFPTQTWQAVKAVFQLRCNGDGSLSSKAPAELWKIVLSPVQATPNYCNNQQKNTP
ANGALPVFELLCHSIFKFQPSWLPKFLELAQQQSSSSSTSSWNFGKETSESLPLYKRALA
VIPCKIACQDLEVELLLCSQRPNAVMQALRMLIGQGQWDRVIQVAERYCRQSPLLNKEIF
STLLIEVSQHRDLDPYLDLLWALCPEDMTVTGILNIVLKNLPSTTQSLDPFQGHSEGSQL
TIGLLKPLLSKVLQRETRSSQRYADILQSPTFPPPTPQRQVVELPEVNTELDIDLKEKLA
SGFPVSTV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacccgacatgttttggaacaggtgacagatttcggagattttacccgaggtaaagaa
ctgaaagactttttgaagcagtttaatagtaaaaattctacaagaagctgcttggctaat
atccgcattagtccagatgggcgacacattcacattatccagcgagctccgagaactggt
ctcatgacccatgacagatatcagagagcccacctagcacaatggcaggagcatcaggat
ttagtgctgacgcggaatgtctccatagttgacctgctttatttcaaccagcaccactca
gaggacgaagcacttctgctgggaataatattcgagaatggcaaagcagaaatttggaaa
tttgctgagaggaaacgtggatggagcttgcttcagactgtggagctctgcaacagcccc
agagccaaaatcgtttcagtttgcattagtcagaatttcattatatggtgtgaggagaga
cctccttcagagagcttgtcagtctccagtgtggatcgcagacacttctcgtactgcatc
tgcaaaaggacttttgatgtagatgaacgagggatctccttaggcggagtgaaaacggca
ctgcacaataatccacattattcagttaccagcactggagatattgtatatctgctacca
attatagagcaagactcttgcaccactgttaataaggtgtttttatcatggtctcctcag
actgatgtctataaggtccacagtgccagtaatggaacactgcttatcagaaatactgca
gcaaacaagcagttagactttaaaagattggtcactgactgcattgggtttctgtccacc
attatcccacctgacatttatggttttagtcctgttggacatggggatatcctgctcctt
ctcagctccggttgggtttgcatgatgcagagagacggaagtcttcggcagatttataaa
ctgcctgacaactgcctcactacatgtgggactcagaacagcttaaacgtgtatgatgaa
attgttgtacttacagtgggcagaatgatgtacctaattgacattaagtgtggcatggag
ttggagaggatccctttaaaaacagaaggcctcctttttgtgaactgtttggagacgcat
tccccacagatgttcacagatgctgggttatatacagtaatccagaaggagaatgaagct
aaatcccagccatccatcgccaatttacaaaatattaacctgagtgctgtcttggttgag
gctgtgtttgaggaggcatgtaaatattatcaacaaagaagtcttagcaccacacagctg
acagctgaaaaacttaaaaagggtgggatgtttcaggcaccgatcacactggcagacatc
atcaggaattatctgggcaatagtaagataaaaccgacagtgaaggattcttcaggacat
gaaaaactaataaactgtctggacactgagctgaagagtttaattgccctagaagacatt
aaagcatcagtggtgaaagcctctgaaaaagatctacagagttattgtgagactcttgtt
cagcaggaactgtgtagacttctcagctcagacatcgatcgggaaaacctacaatatctg
aatagtatgttccaactatttcctacccagacttggcaagcagtaaaggctgtgttccaa
ctccgatgtaatggcgatggctcgttatccagcaaagctcctgctgaattatggaagatc
gttctaagccctgttcaggcaacaccaaactactgtaataatcagcagaaaaacacccca
gccaatggtgcactgccagtcttcgagttgctgtgtcactccatctttaaattccagccc
agctggcttcccaagtttttggagctggcacagcagcagtccagctcttcatctacgtct
tcctggaatttcggaaaggaaacatctgagagcctacctttatacaaacgggctcttgcg
gtcattccttgtaaaattgcctgtcaggacttggaggtggagctgctcttgtgtagccaa
cgacctaatgcagtaatgcaagcactccgcatgctcataggacaaggccagtgggatcgt
gttatccaggtggctgagagatactgccgtcaaagccctcttctcaataaagagattttt
agcacacttctgattgaggtgtcccaacatagagacctggacccctacctggacttacta
tgggccctttgtccagaggatatgactgttactggaattttaaacatagtgctaaaaaat
ttgccatccactacacagtcattggacccattccaaggacattcggaggggagtcagctc
accattgggcttctaaagcctctgctgagtaaagttctccagcgggagacaagatccagc
cagaggtatgcagacattctgcagtcccccaccttccctccacctacaccccagcgtcag
gtcgtagagctgcctgaagtcaacactgagctggacattgacttgaaggagaaattggca
tctggatttccagtcagcactgtctga
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