KEGG   Silurus meridionalis (southern catfish): 124396716
Entry
124396716         CDS       T08004                                 
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
  KO
K20192  Hermansky-Pudlak syndrome 6 protein
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124396716
Membrane trafficking [BR:smeo04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    124396716
SSDB
Motif
Pfam: HPS6_C HPS6 Plk4_PB1 TPR_14
Other DBs
NCBI-GeneID: 124396716
NCBI-ProteinID: XP_046721913
LinkDB
Position
2:complement(16316663..16319639)
AA seq 848 aa
MTRHVLEQVTDFGDFTRGKELKDFLKQFNSKNSTRSCLANIRISPDGRHIHIIQRAPRTG
LMTHDRYQRAHLAQWQEHQDLVLTRNVSIVDLLYFNQHHSEDEALLLGIIFENGKAEIWK
FAERKRGWSLLQTVELCNSPRAKIVSVCISQNFIIWCEERPPSESLSVSSVDRRHFSYCI
CKRTFDVDERGISLGGVKTALHNNPHYSVTSTGDIVYLLPIIEQDSCTTVNKVFLSWSPQ
TDVYKVHSASNGTLLIRNTAANKQLDFKRLVTDCIGFLSTIIPPDIYGFSPVGHGDILLL
LSSGWVCMMQRDGSLRQIYKLPDNCLTTCGTQNSLNVYDEIVVLTVGRMMYLIDIKCGME
LERIPLKTEGLLFVNCLETHSPQMFTDAGLYTVIQKENEAKSQPSIANLQNINLSAVLVE
AVFEEACKYYQQRSLSTTQLTAEKLKKGGMFQAPITLADIIRNYLGNSKIKPTVKDSSGH
EKLINCLDTELKSLIALEDIKASVVKASEKDLQSYCETLVQQELCRLLSSDIDRENLQYL
NSMFQLFPTQTWQAVKAVFQLRCNGDGSLSSKAPAELWKIVLSPVQATPNYCNNQQKNTP
ANGALPVFELLCHSIFKFQPSWLPKFLELAQQQSSSSSTSSWNFGKETSESLPLYKRALA
VIPCKIACQDLEVELLLCSQRPNAVMQALRMLIGQGQWDRVIQVAERYCRQSPLLNKEIF
STLLIEVSQHRDLDPYLDLLWALCPEDMTVTGILNIVLKNLPSTTQSLDPFQGHSEGSQL
TIGLLKPLLSKVLQRETRSSQRYADILQSPTFPPPTPQRQVVELPEVNTELDIDLKEKLA
SGFPVSTV
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgacccgacatgttttggaacaggtgacagatttcggagattttacccgaggtaaagaa
ctgaaagactttttgaagcagtttaatagtaaaaattctacaagaagctgcttggctaat
atccgcattagtccagatgggcgacacattcacattatccagcgagctccgagaactggt
ctcatgacccatgacagatatcagagagcccacctagcacaatggcaggagcatcaggat
ttagtgctgacgcggaatgtctccatagttgacctgctttatttcaaccagcaccactca
gaggacgaagcacttctgctgggaataatattcgagaatggcaaagcagaaatttggaaa
tttgctgagaggaaacgtggatggagcttgcttcagactgtggagctctgcaacagcccc
agagccaaaatcgtttcagtttgcattagtcagaatttcattatatggtgtgaggagaga
cctccttcagagagcttgtcagtctccagtgtggatcgcagacacttctcgtactgcatc
tgcaaaaggacttttgatgtagatgaacgagggatctccttaggcggagtgaaaacggca
ctgcacaataatccacattattcagttaccagcactggagatattgtatatctgctacca
attatagagcaagactcttgcaccactgttaataaggtgtttttatcatggtctcctcag
actgatgtctataaggtccacagtgccagtaatggaacactgcttatcagaaatactgca
gcaaacaagcagttagactttaaaagattggtcactgactgcattgggtttctgtccacc
attatcccacctgacatttatggttttagtcctgttggacatggggatatcctgctcctt
ctcagctccggttgggtttgcatgatgcagagagacggaagtcttcggcagatttataaa
ctgcctgacaactgcctcactacatgtgggactcagaacagcttaaacgtgtatgatgaa
attgttgtacttacagtgggcagaatgatgtacctaattgacattaagtgtggcatggag
ttggagaggatccctttaaaaacagaaggcctcctttttgtgaactgtttggagacgcat
tccccacagatgttcacagatgctgggttatatacagtaatccagaaggagaatgaagct
aaatcccagccatccatcgccaatttacaaaatattaacctgagtgctgtcttggttgag
gctgtgtttgaggaggcatgtaaatattatcaacaaagaagtcttagcaccacacagctg
acagctgaaaaacttaaaaagggtgggatgtttcaggcaccgatcacactggcagacatc
atcaggaattatctgggcaatagtaagataaaaccgacagtgaaggattcttcaggacat
gaaaaactaataaactgtctggacactgagctgaagagtttaattgccctagaagacatt
aaagcatcagtggtgaaagcctctgaaaaagatctacagagttattgtgagactcttgtt
cagcaggaactgtgtagacttctcagctcagacatcgatcgggaaaacctacaatatctg
aatagtatgttccaactatttcctacccagacttggcaagcagtaaaggctgtgttccaa
ctccgatgtaatggcgatggctcgttatccagcaaagctcctgctgaattatggaagatc
gttctaagccctgttcaggcaacaccaaactactgtaataatcagcagaaaaacacccca
gccaatggtgcactgccagtcttcgagttgctgtgtcactccatctttaaattccagccc
agctggcttcccaagtttttggagctggcacagcagcagtccagctcttcatctacgtct
tcctggaatttcggaaaggaaacatctgagagcctacctttatacaaacgggctcttgcg
gtcattccttgtaaaattgcctgtcaggacttggaggtggagctgctcttgtgtagccaa
cgacctaatgcagtaatgcaagcactccgcatgctcataggacaaggccagtgggatcgt
gttatccaggtggctgagagatactgccgtcaaagccctcttctcaataaagagattttt
agcacacttctgattgaggtgtcccaacatagagacctggacccctacctggacttacta
tgggccctttgtccagaggatatgactgttactggaattttaaacatagtgctaaaaaat
ttgccatccactacacagtcattggacccattccaaggacattcggaggggagtcagctc
accattgggcttctaaagcctctgctgagtaaagttctccagcgggagacaagatccagc
cagaggtatgcagacattctgcagtcccccaccttccctccacctacaccccagcgtcag
gtcgtagagctgcctgaagtcaacactgagctggacattgacttgaaggagaaattggca
tctggatttccagtcagcactgtctga

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