Silurus meridionalis (southern catfish): 124396930
Help
Entry
124396930 CDS
T08004
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
smeo04540
Gap junction
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124396930 (pdgfbb)
04020 Calcium signaling pathway
124396930 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124396930 (pdgfbb)
04540 Gap junction
124396930 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124396930 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124396930 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124396930 (pdgfbb)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124396930 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124396930 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
124396930
NCBI-ProteinID:
XP_046722273
LinkDB
All DBs
Position
14:complement(9155880..9170062)
Genome browser
AA seq
535 aa
AA seq
DB search
MCTGLCWLRALLLAACLRFGGAERDPLPVALAELVKSSSVSSTEDLQLMLLSDSVDDDPE
SSNTNNTNNRLPRSLLDAQPAQQAQCKVRTEVMEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKNLKCVAVLTHTRYLQVMKIQYMNMRPVYNKAVVSVNDHVECRCQAVPRPSSRRK
STASKQEARDRSGKPRFKDELHRRDELKPNQRLKLEDLLSHSWPPLENGQDAWSHNNTQL
RMSRGYSFGDGRKSNSSSNDTKGWSSERQANPIPSHINKENTGLIIHNVLRASEKVGETG
DKGVQTNSTINDDRLINQSLGVHPTEITNQIPQHESETIQCTELSKTAKNSQVHKNHTTS
QMETTQNQTHSGAHAGQANQTMVSKPAEKTNQKQGHGFNAEKEPSVRTKGNETPEMESTQ
EETEGIRSRSTLLKEIKALEEEKEELLLLHKRLDEEKLKHFLKAQNSPHEDQKQHPMHHK
PQQTHTTTQRTESRTTTPVRLSTPHTPPRLPPRPPKRSRKHRNRISKAVMRAMLM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactgggctctgctggctgcgcgcgctgctgctcgcggcgtgtctgcgtttcggc
ggcgcagagagagatcctctccctgtagctctggctgagctggtgaagagcagctctgtc
tcctctacagaagatctgcagctgatgttgctctctgactccgtagatgatgatccagaa
agcagcaataccaacaacaccaacaaccggctgccaagaagccttctggatgctcagcct
gcacagcaagcccagtgtaaagtgaggacagaggtcatggaggtaacccgctctatgcta
gaccgtagcaatgctaactttctgctgtggccgccatgtgtggaggtgcagagatgctct
ggttgctgcaacacaaaaaacctgaagtgtgtcgctgtactcactcacacacgctatcta
caggttatgaagatccagtacatgaacatgcgcccagtttacaacaaagctgtagtctca
gttaatgatcatgtggagtgccgctgtcaagctgttcctcgtccatcctcccgcagaaag
tctactgctagcaaacaagaagcaagagatcgttcgggtaaacctcgttttaaagatgag
cttcatcggagagatgagcttaaacccaaccagaggcttaaattagaggatctgctaagc
cacagctggccacctctggagaatggacaagatgcctggagccataacaatacgcaacta
agaatgagcagaggttattcatttggagatgggaggaagagtaactccagctccaatgac
accaagggttggtcttctgagagacaggcaaatcctatacccagtcacattaacaaagaa
aatacaggtttaataatacataatgtattgagggcaagtgaaaaagtgggagagacagga
gacaaaggtgtacaaacaaacagtacaataaatgatgataggctgattaatcagtcatta
ggggtccatcccactgaaataaccaatcagattccacagcatgaatctgagacaatacaa
tgcacagagctgagcaagactgccaagaacagtcaagtacacaaaaatcatactacttcc
caaatggagaccacccagaatcagactcacagtggagcacacgctgggcaagctaatcag
acaatggtttctaaacctgctgagaaaaccaatcagaagcaaggccatggctttaatgca
gaaaaagaacctagtgtaaggaccaagggaaatgagaccccagaaatggagagcactcaa
gaggagacagaggggatcagaagcaggtccactttgctgaaggaaattaaggctttggag
gaggagaaagaggagctgctgttacttcacaagcgtctcgatgaagaaaagctcaaacat
ttcctgaaagcacaaaacagtccacatgaggaccaaaaacagcacccgatgcaccacaaa
cctcagcaaacacatacaactacacaacgaacagaaagcagaacgactactccagtcaga
ctgtccactccacacacaccaccccgactgccccctcgtccaccaaagagatcgaggaaa
caccgcaatcgcataagcaaggctgtcatgagggccatgctcatgtag
DBGET
integrated database retrieval system
