Silurus meridionalis (southern catfish): 124397107
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Entry
124397107 CDS
T08004
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124397107 (trpm4a)
Ion channels [BR:
smeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124397107 (trpm4a)
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Beach
Motif
Other DBs
NCBI-GeneID:
124397107
NCBI-ProteinID:
XP_046722560
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Position
14:307768..364969
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AA seq
1332 aa
AA seq
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MPSNMLMKMKMMMMIVSLVWPWTIHPRVEDHPHGAARLFLRARAGTGGEPEGNRAGGRRH
DSRQRERVGKGRVCKRRKRSGLDSEGNKEESVYVVVEDPLSNGDQCQCGGAQSSHGSAAT
GDYFSAAIVTQWDSSKHTSEYPTDAFGELKFAGIARRHSHFLRLSCDTPSPLVYALLTQH
WALPSPNLVVSVVGGIGKEKVRSWVRDVVRQGLVRAAQSTGAWIVTSGLREGVGRCVGEA
VRDHGAAAASQSKVVALGVAPWGLVDNRQQLINSEGSFPARYYVQNTVRDSCYLDSNYQA
FLLVDDGSIGRRGGESSFMTSLEKFISHQRTGIWGSGSIEIPVLCMLISGDASALKRMDV
SLRASTPWLVLNGSGPAADMISELLSELNRAASPVEGEGGDRPNSEIRDQVREIIKKYFP
TEKLLEKMVDQSLSIYQNRSLITVFHGEQDTPDDFDTVILKSLVGASKQVSSNSSEYTEE
LKLAVAWNRVDIAKSELFNGDIQWKYSDLEDSMTDALVNDKPQFVRLFTENGLNILEYLT
YARLENLYQSLSNSTLVYSLLQGLLRERHHLASSQTCSPDSTDGNFKSLKTPVTGLSGGR
GLCLFEVSRLLGEIFGGMCQPFYYMPLGLEAGVSSRRAAKYVNTLLQGDCGYRHQQVAFP
WSSLLIWAVLQNRSEMAILFWEMAGESVMSALSACKILREMSKLENETENQLSMKDLAQK
FENLANDMFSACYQSNDSRSLTLLIRMSPFWGGATCLQMATASEARLFFSHDGVQSLLAQ
IWWGDMHSRTEVWKLIAAFFFPPLIYTNFITFRDHQDRHGDGLEGSHTVAFSMADITQHM
DDDNKLDDNGHGGDRDNDGDRGHVCSLNDITLPDEDLEEHTVLTKDFKRKPVSPPQHPYI
IHRWRQFWFAPITSFLGNVLMYFLFLMLFAYILLVEFKPPPPDGPAPIEYLLYFWVFTLV
CEEIRQSFVMGGGTFSQSVALYIQDMWNKCDLTAICLFILGLTCRMFPWSYEFGRSVLCV
DYMVFTLRLIHIFAVNKHLGPKIIIVGKMVKDVFFFLFFLGVWLLAYGVANQALIYAYDP
RPYWVIRRVFYRPYLHIYGQIPLDEIDAHKRIGKTCTHNVTEIQHGAEPCPQSEANWLVL
ILLSIYLLVTNILLLNLLIAMFSYTFSKVQEHSDIHWKFQRYNLIVEYHSRPCLAPPFII
LSHFRLFIKRTIRKVPSGKIKHFMLDLRGRKASRLDTWEVVQKENLLLTQSKKFRDSDSE
RLKRTSSKVDNMLKQIAEIRDQDRRLRTLESELEYCSSSLSWIIEELVQSDLIKHNRRPP
VHRDSSPPTPHS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaacatgctcatgaagatgaagatgatgatgatgatagtaagtctggtatgg
ccgtggaccatccacccgcgagtggaagatcatccccacggcgcagcgcgattgttcctt
agagcgcgcgcaggaaccggaggggaaccggaggggaaccgagcaggtggaaggagacat
gactccagacagagagaacgagttgggaagggaagggtctgtaaaaggagaaaaagatca
gggttggattccgaaggtaataaagaagagagtgtgtacgtcgttgtggaggatcctctc
agtaatggagatcagtgtcagtgtggaggtgctcagagttctcatggttctgcagctaca
ggtgattatttcagtgctgccatcgtaactcaatgggattcatccaaacacacgtctgag
tatccgactgacgcttttggggaactcaagtttgccggcatcgcccgcagacacagtcat
ttcctgcgcttgtcgtgtgacactccgtctcctctcgtctatgccctcctgactcagcac
tgggctctgccctctcccaacctagtggtgtctgtggtggggggcatcggcaaggagaag
gtcaggagctgggtacgagacgtggtgagacaagggctggtccgagctgcacagagcaca
ggtgcctggatcgtgacgagtgggctgagggagggtgtgggccgctgtgtgggtgaggca
gtgagggatcacggagccgcagctgcgtctcaatccaaagtggtagctctgggcgtggcc
ccctggggactggtggacaaccgccagcaactcatcaattctgagggcagcttcccagcc
aggtattatgttcagaacacggtgcgggactcgtgctacctggacagtaattatcaggct
ttcctcctggtggacgatgggagcatcgggcggagaggtggagagtccagcttcatgacc
agcctggagaaattcatctcccatcagcgcaccgggatctggggtagtgggagcattgag
atccccgtgttgtgtatgctgatctcgggtgatgcgtctgcgctgaagaggatggacgtg
tctctgagggcatccacaccctggttagtgttaaatggttcaggtcctgcagccgacatg
atctcagagttattgagtgagctgaaccgagcagcgtcccctgtagaaggggagggtgga
gaccgccccaactcggaaatccgagatcaagtgagagagatcatcaagaaatatttcccc
actgagaaattactggagaagatggtggaccagtctctgagcatctaccagaacagatct
ctgattacggtgttccatggagaacaggacacgcctgatgatttcgacacggtcatcctc
aaatcgctagtgggagccagtaagcaggtgagcagtaactccagtgagtacacagaggag
ctgaagttggctgtggcctggaacagagtggacattgcgaagagtgagctgttcaacggc
gacatccagtggaagtatagtgacctggaggactccatgacggacgcgttggtgaacgat
aagcctcagtttgttcgtctcttcacggagaacggtctgaacattctggagtacctgacc
tatgcgcgtttggagaacctgtaccagtctctctccaacagcactctggtctactctctg
ctgcagggattattgagagagagacaccacctggcctcctctcagacctgctcccccgac
tccactgatgggaacttcaagtccctgaagactcctgtgacggggctttcgggcggccgt
gggctctgcctgttcgaggtctcgcggttattaggggagattttcgggggtatgtgccag
ccgttttattacatgcccctcggcctggaggcaggagtgagctcgaggagagcggcgaag
tatgtgaatacgctcctgcagggtgattgtggttatcgtcatcagcaggttgccttcccc
tggtcttctctcctcatctgggccgtcttgcagaaccgtagtgagatggccattttattc
tgggagatggcgggtgagtctgtaatgagcgcgctcagtgcgtgtaagatcctcagagag
atgtccaagctggaaaatgagactgagaaccagctctctatgaaggacctggctcagaag
tttgagaacctggctaatgacatgtttagcgcctgttaccagagtaacgactctcgctcc
ctcacgctgctcatacggatgtctccgttttggggcggagctacctgtctacagatggcc
acggcgtcagaagccagacttttcttcagccacgacggtgtgcagtctctgctggctcag
atctggtggggagacatgcacagccgcactgaagtgtggaaactcatcgctgccttcttt
tttcctccgctcatctacaccaacttcatcaccttcagagaccaccaggatagacatgga
gatggtctggagggctctcacactgtagcgttctctatggctgatatcacacagcacatg
gatgatgataataaactggatgataatggtcatggtggagacagggacaacgatggagac
agaggtcacgtctgctctctcaatgacatcacactcccagacgaggacttggaggaacac
actgttttaaccaaagactttaaacgtaaaccagtttcaccccctcagcatccatacatc
atacaccgatggcggcagttctggttcgctcccatcacctcgtttctaggcaacgtccta
atgtacttcctgttcctcatgctgtttgcttacatcctattggtcgaatttaaacctccg
cctccagatggccccgcccccatcgagtatctgttgtacttttgggtgtttactctggtc
tgtgaggagattcgacagtcgttcgtcatgggtgggggaactttctctcagagtgtggcg
ttatacatccaggacatgtggaacaagtgtgatctcacagccatctgcctctttatcctc
ggcctcacttgcaggatgttcccctggtcgtatgaattcggtcgctcagtgctgtgtgtg
gactacatggtcttcactcttcggctcattcacatctttgccgttaacaaacacctcgga
cccaaaatcatcatcgtcggcaaaatggtgaaggatgttttcttcttcctgttcttcctg
ggagtctggcttttggcttacggcgtggccaatcaggcgctgatatacgcctacgacccg
cggccgtactgggtgatccgcagagtgttctacagaccgtacctgcacatctacggccag
atacctctcgatgaaatagacgctcataagcgtatagggaagacctgcacccacaatgtg
accgagatacagcatggagctgaaccctgtcctcagtctgaagctaactggctcgtcctc
atcctgctgtccatctacctgctggtcaccaacatcctgctgcttaacctcctcatcgcc
atgttcagctacacgttcagtaaggtacaggagcacagtgacattcactggaagttccag
cgttataatctgatagtagagtaccactcccggccctgcctggctccgcccttcatcatt
ctctctcacttccgcctcttcatcaagagaaccatccgcaaagttccttctgggaaaatc
aaacacttcatgttggatctgcggggcaggaaggcgagcaggttggacacatgggaagtc
gtacagaaggagaatttactgttgactcagagtaagaagttcagggacagtgacagcgag
agactcaaacgcacatcttccaaggtggacaacatgctgaagcagatagcagagattcga
gatcaggaccggagattgagaacgctggagtctgagctggagtactgctctagctccctc
tcgtggataatagaggaactggtgcagagcgacctgatcaagcataaccgtcggccccct
gtccaccgagactcgagtccaccgactcctcactcctga
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