Silurus meridionalis (southern catfish): 124398908
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Entry
124398908 CDS
T08004
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04120
Ubiquitin mediated proteolysis
smeo04144
Endocytosis
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124398908 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124398908 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124398908 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124398908 (itchb)
04121 Ubiquitin system [BR:
smeo04121
]
124398908 (itchb)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124398908 (itchb)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124398908 (itchb)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
HECT type E3
124398908 (itchb)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124398908
NCBI-ProteinID:
XP_046725374
LinkDB
All DBs
Position
16:complement(15890429..15908246)
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AA seq
850 aa
AA seq
DB search
MASSIPKPSPGNGHPMKAQLQITGISAKLKDSKKNWFGPSLYVEVAVDGQSKKTEKCSNT
HNPKWKNPQTVIVTPFSKLNFRLWSQKPLKSDLLGTATLDISEMLKSNDMKLCDVKQTLS
LCSDSEQTDVVGDLSVCLDGLQVDPAAFTTAEANNQSTTNGESQNNEDVSTRRSRESSPS
VLDLLSRRVVNGSSSPSMSNRVSRPQRPPRPSRPPPPTPQRPVSSPAFQAGSTVTDSSNS
AQPETLVQVPKTNPEPPPAIPVASLPTRMPITNTGPLPPGWEQRVDASGRIYFVDHVGKR
TSWERPEALPPGWELRLDQSGRVYFVDHMSRTTTWQRPTVETVRNYEQWQHQRNRLEGAM
HQFNQRFIYSDQAGPAQNKEYDPLGPLPHGWEKKTDPNGRIYFVHHLTRTTQWEDPRNQG
LLNEKPLPEGWEMRFTVEGIPYFVDHNRKTTTYIDPRTGKSSLENGPQITYVRDFKAKVQ
YFKFWCQQLAMQQHIKITVSRKSLFEDSFQQIMSISPQDLRRRLWIIFPGEEGLDYGGVA
REWFFLVSHEVLNPMYCLFEYAGKDNYCLQINPASSINPDHLKYFRFIGRFIAMALFHGK
FIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKDNNIEECGLEMFFSVDKDILG
EITTHDLKPGGGDIQVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYF
DAKELEVLLCGMQEIDLADWQKHTIYKHYTRTSKQIVWFWQLVKEMDNEKRMRLLQFVTG
TCRLPVGGFTDLMGSNGPQKFCVEKTGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFA
IEETEGFGQE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagcattcccaaaccaagccctggaaatggccaccccatgaaggctcagctg
cagatcacagggatatcagccaagctgaaggacagcaagaagaactggttcgggcccagt
ctctacgtggaggtggctgtagacggccagtccaagaagacagagaagtgcagcaacaca
cacaacccaaagtggaagaatccacaaactgtgatcgtgacaccattcagcaagctgaat
ttccgtctatggagtcaaaagccgctgaagtccgacctcttgggcacggccacgcttgac
atcagtgagatgctcaaaagcaacgacatgaagttgtgtgacgtgaagcagacgttgtca
ttgtgctcagacagtgagcagacagatgttgttggagatctgtctgtgtgtctggacggc
ctgcaggtcgacccggcggcatttaccaccgctgaggctaacaaccagagcaccacaaac
ggagagtcgcagaataacgaggacgtcagcacaaggagaagcagagagagttctccaagc
gtgttggaccttctcagcagacgtgtggtcaatggatccagctcaccgtctatgtcgaat
cgtgtgtcacgaccccagaggccacccagaccctctcgaccaccgccgcccaccccacaa
cgcccagtgtcttctccggcattccaagcaggttctacagtcacagacagcagcaactct
gctcagccagagactttggtgcaggtccctaaaaccaaccctgaacctcctcctgccatt
cctgttgcttctttgcccacccggatgcccatcaccaacacggggcctctgccaccaggg
tgggagcagcgagtggacgcgagcggccgcatatactttgtggaccatgtggggaagagg
acgtcgtgggagagacccgaggctctgcctcctggttgggagctgcgcctggaccaatca
ggacgcgtgtactttgtggaccacatgagcaggacgacgacgtggcagcgtcccactgtg
gagacggtgcgcaactacgaacagtggcagcaccagaggaaccggttagagggggccatg
catcagtttaatcagcgcttcatctacagcgatcaggctggacctgctcagaataaagag
tatgacccactcggaccactgccacacggatgggagaagaaaacggaccctaacggccga
atttattttgtgcaccacctgactcgcaccacgcagtgggaggatcctcgcaatcaaggg
ctgctgaatgagaagccgctgcctgagggctgggagatgaggtttacagtggaggggatt
ccatacttcgttgatcacaacagaaaaaccaccacctacatcgacccgcggacaggaaaa
tcatcccttgaaaacggccctcagatcacctacgtgcgcgacttcaaagccaaagtccag
tacttcaaattctggtgtcagcaattagcgatgcagcagcacatcaagatcacggtgagc
cgcaagtcgctgttcgaagactctttccagcagataatgagcataagtccacaagacctt
cgccgaagactgtggatcatcttccccggggaggaaggactcgactacggtggtgtagca
agggagtggttctttctggtgtcccacgaggtactgaaccccatgtactgcctgtttgaa
tacgccggcaaggataactactgtctgcagatcaacccagcttcatccatcaacccagac
cacctcaaatacttccgcttcattggccgcttcatcgccatggctttattccacgggaag
ttcatcgacacaggtttctcgctacctttctataaacggattcttaacaaacctctggcc
ctgaaagacctcgagtccatcgaccccgaattctacaactcgctgatctggatcaaagac
aacaacatcgaggagtgcggtctggagatgttcttctcagtggataaggacatcctcggg
gagatcacaacacacgatctgaaaccaggcggaggagacattcaggtcacagaggagaac
aaagaggagtacatcaggctggtagctgagtggagattgtcccgaggtgtggaagaacag
acgcaggctttcttcgagggctttaacgaggtcctgcctcagcaatacctacaatacttt
gatgccaaagagctcgaggtgttgttgtgtgggatgcaggaaatcgatctggcagactgg
cagaaacacaccatctacaaacactacacacgtaccagcaagcagatcgtgtggttctgg
cagttggttaaagagatggacaacgagaagcgaatgcgtctgctgcagttcgtcaccggg
acgtgccgtctgcccgtgggcgggttcactgacctcatggggagtaacggcccacagaag
ttctgcgttgagaaaacagggaaggagaactggctgccccggagccacacgtgctttaac
cggctggacctccctccgtataaaagctacgagcagctaaaggagaaactgctgtttgcc
atagaggagactgagggctttgggcaggagtaa
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