Silurus meridionalis (southern catfish): 124399335
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Entry
124399335 CDS
T08004
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A
KO
K08539
vitamin D3 receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124399335 (vdra)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124399335 (vdra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124399335 (vdra)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124399335 (vdra)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124399335 (vdra)
Nuclear receptors [BR:
smeo03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
124399335 (vdra)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
124399335
NCBI-ProteinID:
XP_046726165
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Position
16:14313780..14370463
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AA seq
429 aa
AA seq
DB search
MVRKSARISPVMEAMAVSTSAQGTDELDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILK
RKEEEAMREAQKPRLTEEQSQIINTLVEAHHKTYDDSYSDFAKFRPPVREGPVTRSASRA
ASLHSLSDASSDSLNNSPESMDKKLSSLFSMCQDGVMSPDSRDENSRLSMLPHLADLVSY
SIQKVIGFAKMVPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLDDMSWSCGGPDFKYC
VNDVTKAGHTLELLEPLVKFQVGMKKLNMQEEEHVLLMAICLLSPDRPGVQDHVRIEAMQ
ERLCETLQAYIRVHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLV
LEVFGSEVS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaagtccgcccggatctcccctgtaatggaggccatggccgtgagcacatct
gcacagggtacagatgaactagaccgcaacgccccacggatttgcggcgtctgcggagac
aaggccaccggattccacttcaacgccatgacctgcgaaggctgcaagggctttttcagg
cgcagcatgaagcggaaggccagtttcacttgtccctttaacggcagctgcaccatcacc
aaagacaaccgcaggcactgccaggcctgtcgcctcaaacgctgcgtcgacatcggcatg
atgaaggagttcattctgactgacgaggaggtgcagaggaagaaggagctgatcctaaag
agaaaggaggaggaggcgatgcgggaggcgcaaaagcccaggctgacggaggaacagagt
cagatcatcaacacgctggtggaggcacatcacaagacctacgatgactcgtactccgac
tttgcgaagttcagacccccagtgagagagggtccagtgacacgcagtgccagtcgtgcc
gcctctctccactcactctcagatgcctcttcagattcattgaacaactcaccagagtca
atggacaaaaaactcagcagcctcttctccatgtgtcaggacggcgtgatgagcccagac
tccagggatgaaaactcccggctctccatgctgccccacctggctgaccttgtcagctac
agcatccagaaagtgatcgggtttgccaagatggtccccggcttcagggatctgactgca
gaagatcagatcgctctcctgaagtccagcgcgatcgagatcatcatgttgcgctccaac
cagtccttcagtctggatgacatgagctggagctgcggagggccggacttcaaatactgc
gttaatgacgtcaccaaggctggtcacactctggagctgctggagccactggtgaagttt
caggtggggatgaaaaaactcaacatgcaggaagaggaacatgtgctgctaatggccatc
tgtctcctctctccagaccgtcccggcgtgcaggaccacgttcgtatcgaggcgatgcag
gagcgcttgtgcgagactctgcaagcgtatatccgcgtgcaccacccgggcggccgtctc
ctctacgccaagatgatccagaagctggctgacctgcgcagcctgaacgaggagcactcc
aagcagtaccgctcgctctccttccagcccgagcacagcatgcagctcacaccgctcgtg
ctcgaggtcttcggcagcgaggtgtcctag
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