KEGG   Silurus meridionalis (southern catfish): 124399335
Entry
124399335         CDS       T08004                                 
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A
  KO
K08539  vitamin D3 receptor
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smeo01009]
    124399335 (vdra)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smeo03000]
    124399335 (vdra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:smeo03310]
    124399335 (vdra)
Protein phosphatases and associated proteins [BR:smeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124399335 (vdra)
Transcription factors [BR:smeo03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    124399335 (vdra)
Nuclear receptors [BR:smeo03310]
 1. Thyroid hormone like
  1I. Vitamin D3 like receptor
   124399335 (vdra)
SSDB
Motif
Pfam: zf-C4 Hormone_recep PCF11_charged
Other DBs
NCBI-GeneID: 124399335
NCBI-ProteinID: XP_046726165
LinkDB
Position
16:14313780..14370463
AA seq 429 aa
MVRKSARISPVMEAMAVSTSAQGTDELDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILK
RKEEEAMREAQKPRLTEEQSQIINTLVEAHHKTYDDSYSDFAKFRPPVREGPVTRSASRA
ASLHSLSDASSDSLNNSPESMDKKLSSLFSMCQDGVMSPDSRDENSRLSMLPHLADLVSY
SIQKVIGFAKMVPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLDDMSWSCGGPDFKYC
VNDVTKAGHTLELLEPLVKFQVGMKKLNMQEEEHVLLMAICLLSPDRPGVQDHVRIEAMQ
ERLCETLQAYIRVHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLV
LEVFGSEVS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggttcgaaagtccgcccggatctcccctgtaatggaggccatggccgtgagcacatct
gcacagggtacagatgaactagaccgcaacgccccacggatttgcggcgtctgcggagac
aaggccaccggattccacttcaacgccatgacctgcgaaggctgcaagggctttttcagg
cgcagcatgaagcggaaggccagtttcacttgtccctttaacggcagctgcaccatcacc
aaagacaaccgcaggcactgccaggcctgtcgcctcaaacgctgcgtcgacatcggcatg
atgaaggagttcattctgactgacgaggaggtgcagaggaagaaggagctgatcctaaag
agaaaggaggaggaggcgatgcgggaggcgcaaaagcccaggctgacggaggaacagagt
cagatcatcaacacgctggtggaggcacatcacaagacctacgatgactcgtactccgac
tttgcgaagttcagacccccagtgagagagggtccagtgacacgcagtgccagtcgtgcc
gcctctctccactcactctcagatgcctcttcagattcattgaacaactcaccagagtca
atggacaaaaaactcagcagcctcttctccatgtgtcaggacggcgtgatgagcccagac
tccagggatgaaaactcccggctctccatgctgccccacctggctgaccttgtcagctac
agcatccagaaagtgatcgggtttgccaagatggtccccggcttcagggatctgactgca
gaagatcagatcgctctcctgaagtccagcgcgatcgagatcatcatgttgcgctccaac
cagtccttcagtctggatgacatgagctggagctgcggagggccggacttcaaatactgc
gttaatgacgtcaccaaggctggtcacactctggagctgctggagccactggtgaagttt
caggtggggatgaaaaaactcaacatgcaggaagaggaacatgtgctgctaatggccatc
tgtctcctctctccagaccgtcccggcgtgcaggaccacgttcgtatcgaggcgatgcag
gagcgcttgtgcgagactctgcaagcgtatatccgcgtgcaccacccgggcggccgtctc
ctctacgccaagatgatccagaagctggctgacctgcgcagcctgaacgaggagcactcc
aagcagtaccgctcgctctccttccagcccgagcacagcatgcagctcacaccgctcgtg
ctcgaggtcttcggcagcgaggtgtcctag

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