Silurus meridionalis (southern catfish): 124399574
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Entry
124399574 CDS
T08004
Symbol
gnb1a
Name
(RefSeq) guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
KO
K04536
guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
smeo04082
Neuroactive ligand signaling
smeo04371
Apelin signaling pathway
smeo04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
124399574 (gnb1a)
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124399574 (gnb1a)
04081 Hormone signaling
124399574 (gnb1a)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124399574 (gnb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124399574 (gnb1a)
04031 GTP-binding proteins [BR:
smeo04031
]
124399574 (gnb1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124399574 (gnb1a)
Exosomal proteins of colorectal cancer cells
124399574 (gnb1a)
Exosomal proteins of melanoma cells
124399574 (gnb1a)
GTP-binding proteins [BR:
smeo04031
]
Heterotrimeric G-proteins
Beta Subunits
Beta [OT]
124399574 (gnb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_EIPR1
eIF2A
WD40_RFWD3
Beta-prop_HPS5
DUF4407
Myc-LZ
CaM_bind
Motif
Other DBs
NCBI-GeneID:
124399574
NCBI-ProteinID:
XP_046726544
LinkDB
All DBs
Position
17:8279334..8306107
Genome browser
AA seq
340 aa
AA seq
DB search
MSELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYA
MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI
CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF
AGHTGDVMSLSLAPDARLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNA
FATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL
KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcgatcagctacgccaggaggctgagcagctgaagaaccagatcagagat
gcaaggaaagcatgtgcggatgccaccctgtctcagattacagccaacatcgacccagtt
gggcgaattcagatgcgcaccaggcggacactgcgaggtcacctggctaaaatctacgcc
atgcactggggcactgactcacggctccttgtcagtgcctcccaggatggtaaacttatc
atctgggacagctataccacaaacaaggtgcatgccatcccattgcgctcctcatgggtg
atgacgtgtgcgtacgctccgtctggcaactacgtagcttgtggtggcctggacaacatc
tgctccatctacaatctgaagacacgtgagggcaatgtccgtgtgagccgtgagctggct
ggccatacaggttacctctcctgctgtcgtttcctggatgacaaccagattgtcactagc
tcaggcgacaccacctgtgctctttgggacattgagacggggcagcagacgaccacgttc
gcaggccacaccggggatgtgatgtctctgtctctggctccggatgcccgcttatttgtc
tctggagcttgcgatgcctctgctaagctttgggatatcagagagggcatgtgcagacag
accttcactggccatgaatcagacatcaacgccatctgtttcttccccaatgggaatgca
tttgccacaggctcggacgacgctacctgcaggctgttcgacctgcgtgctgaccaggag
ctgatggtgtactcgcacgacaacatcatctgtggcattacctcggtggccttctccaaa
agcggccgtttgctgctcgctggctacgatgacttcaactgcaatgtctgggacaccctc
aaagccgaccgtgcaggtgtcctggcaggccatgataaccgtgttagctgcttgggtgtt
actgatgatggaatggcagtggccacaggctcttgggatagtttccttaagatctggaat
taa
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integrated database retrieval system
