KEGG   Silurus meridionalis (southern catfish): 124400112
Entry
124400112         CDS       T08004                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagosome
smeo04514  Cell adhesion molecules
smeo04672  Intestinal immune network for IgA production
smeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124400112
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124400112
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    124400112
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124400112
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124400112
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124400112
  Exosomal proteins of epithelial cells
   124400112
  Exosomal proteins of breast milk
   124400112
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 Ig_2 C2-set_3 Psg1 Cna_B DUF5562
Other DBs
NCBI-GeneID: 124400112
NCBI-ProteinID: XP_046727677
LinkDB
Position
17:1342168..1344732
AA seq 250 aa
MLKMKMFLLLLLLPAVLNTAYGHSFAVPIQCIWSKEDMSDMELIEPYIINKIKYAEYNST
LGKYTGYTETGVRNAEEWNKDTALLQSRKADVERYCKHNAQLYYTAIFSKTVEPVVKVKM
VQKSEGSHVDNLMCSAYSFYPPHIKVTWMRNGKEVKADVTSTEEMPDGDWYYQIHSHLQY
KPESGEEISCVVEHASFKKPMIYKWDPSMPESDKSKIAIGASGLVLGIIISAAGFIYYKK
KHSGRILVPT
NT seq 753 nt   +upstreamnt  +downstreamnt
atgttgaagatgaagatgtttctgctgctgctgctgctgcctgcagtcctgaatacagca
tatggacattcatttgcagtaccaatacagtgtatctggagtaaagaagatatgagtgat
atggagttaattgagccctacatcattaataagattaagtatgcggagtataacagcact
ctggggaagtatacaggatacactgagacaggagtcagaaacgcagaggaatggaataaa
gacactgcattactgcagtcacgaaaagctgatgtggagagatactgtaaacacaatgct
cagctttactacaccgccatcttcagtaaaacagttgaacctgtggttaaggtgaagatg
gtgcagaagtcagaaggttctcacgtggacaatctgatgtgcagcgcttacagtttttac
cctccacacattaaagtcacctggatgaggaacggtaaggaggttaaggctgatgtgacg
tccactgaggagatgcctgatggagactggtactatcagatccactctcacttgcagtac
aaacctgaatctggagaggagatctcctgtgtggtggaacacgccagcttcaaaaaaccc
atgatctataagtgggacccgtccatgcctgaatctgataagagtaagatcgctatcgga
gcttcagggttggtgttggggatcataatctcagcagctggattcatctactacaagaag
aaacactcaggacggatcctggtgcccacataa

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