KEGG   Silurus meridionalis (southern catfish): 124400114
Entry
124400114         CDS       T08004                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-D alpha chain-like
  KO
K06752  MHC class II antigen
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagosome
smeo04514  Cell adhesion molecules
smeo04672  Intestinal immune network for IgA production
smeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124400114
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124400114
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    124400114
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124400114
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124400114
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124400114
  Exosomal proteins of epithelial cells
   124400114
  Exosomal proteins of breast milk
   124400114
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 ig I-set C2-set_3 DUF5920
Other DBs
NCBI-GeneID: 124400114
NCBI-ProteinID: XP_046727679
LinkDB
Position
17:1350945..1353108
AA seq 243 aa
MLCPNTVKMKILLIFMILSYVKDIRAQIKHVDIQLSGCTESDKEFVMEQDEDEIFHSDFK
KQGLVMKLPDFADPINWPTAYEYSVSEQEICKHNLDLAVSVYKNPPEALDVPQNSIYSKS
NVELGAQNTLICHSMRFFPPPVRIHWTRNGEDVTESSTLSQFYPNEDNTYNQFSHLTFTP
QQGDVYSCTVEHKALQIPDTMTWDVDVKLPSVGPAVFCGVGLAVGLLGVATGTFFLVKGN
QCN
NT seq 732 nt   +upstreamnt  +downstreamnt
atgctctgtccaaacactgtaaaaatgaagatacttctgatattcatgattctatcatac
gtgaaggacatcagggctcagattaagcatgtggacattcagttaagtggatgtactgaa
tcagataaagagtttgtgatggaacaagatgaagatgaaatatttcactcagattttaaa
aaacaaggtctggtgatgaagttacctgactttgcagaccctataaattggcctactgca
tatgaatacagtgtctcagaacaagaaatctgcaaacacaacctcgatctagcagtgagt
gtatacaaaaaccctccagaggctctcgacgtcccacaaaattccatctattctaaaagt
aatgtggaactgggagcacagaacacactcatctgtcactcaatgcgtttcttccctcct
cctgtccgcatccactggaccagaaatggagaagatgtgacagagagctccacactcagt
cagttctaccctaatgaagacaacacctacaaccagttctcccacctgaccttcactcct
caacaaggagatgtttacagctgcacagtggagcacaaggcgctgcagatacctgacacc
atgacatgggacgtggatgttaagcttcccagtgtaggtccggctgtgttttgtggagtg
ggtctggctgtggggcttctgggagtcgctactggaactttcttcctggttaaaggaaac
cagtgtaactga

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