Silurus meridionalis (southern catfish): 124400118
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Entry
124400118 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: H-2 class II histocompatibility antigen, A-Q alpha chain-like
KO
K06752
MHC class II antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
smeo04514
Cell adhesion molecules
smeo04672
Intestinal immune network for IgA production
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124400118
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124400118
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124400118
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124400118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124400118
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124400118
Exosomal proteins of epithelial cells
124400118
Exosomal proteins of breast milk
124400118
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Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
ig
I-set
Motif
Other DBs
NCBI-GeneID:
124400118
NCBI-ProteinID:
XP_046727682
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All DBs
Position
17:1336628..1338776
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AA seq
235 aa
AA seq
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MKLFLILFTLMCVKDTGAQSKHTQIELIECSDTDKEYMIGTDGEEQFYVDFEKKEGVVML
PXFADPISYPGQYAFAEANMPICKQNLDVWKQDFKDQPVPKDPPQSSIYPKQKMQLGSQN
LLVCHFTRFFPPHVTVRWTKNNVDVTESSTLSRYYPNEDNTYNQFSHLLFTPQEGDVYTC
TVEHEALQNPDTKTWEVDVELPSVGPAVFCGVGLAVGLLGVATGTFFLVKGNQCN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatttctgatcttgttcacactgatgtgtgtgaaggacactggagctcagagt
aaacacactcaaattgaactgatcgaatgctcagacacggataaagagtatatgataggg
accgatggagaagagcagttttatgtagattttgagaagaaggagggggtggtcatgctg
cccncgttcgctgatccgatcagttaccccggacagtacgcgttcgccgaggctaatatg
cccatctgcaaacaaaacttagacgtgtggaaacaagactttaaagatcagccggtgcca
aaggatcccccacaaagctccatctatcccaagcaaaagatgcagttggggtcacagaat
ctgctcgtctgtcacttcacacgatttttccctccacatgtgactgtacgatggaccaaa
aacaacgtggatgtgacagagagctccacactcagtcgttactaccctaatgaagacaac
acctacaaccagttctcccacctgctcttcactccacaggagggagatgtttacacctgc
actgtggagcacgaggcgctgcagaaccctgacaccaagacatgggaggtggatgttgag
cttcccagtgtaggtcctgctgtgttttgtggagtgggtctggctgtgggtctgctggga
gtcgctactggaactttcttcctggttaaaggaaaccagtgtaactga
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