KEGG   Silurus meridionalis (southern catfish): 124400118
Entry
124400118         CDS       T08004                                 
Name
(RefSeq) LOW QUALITY PROTEIN: H-2 class II histocompatibility antigen, A-Q alpha chain-like
  KO
K06752  MHC class II antigen
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04145  Phagosome
smeo04514  Cell adhesion molecules
smeo04672  Intestinal immune network for IgA production
smeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124400118
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124400118
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    124400118
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124400118
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124400118
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124400118
  Exosomal proteins of epithelial cells
   124400118
  Exosomal proteins of breast milk
   124400118
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 124400118
NCBI-ProteinID: XP_046727682
LinkDB
Position
17:1336628..1338776
AA seq 235 aa
MKLFLILFTLMCVKDTGAQSKHTQIELIECSDTDKEYMIGTDGEEQFYVDFEKKEGVVML
PXFADPISYPGQYAFAEANMPICKQNLDVWKQDFKDQPVPKDPPQSSIYPKQKMQLGSQN
LLVCHFTRFFPPHVTVRWTKNNVDVTESSTLSRYYPNEDNTYNQFSHLLFTPQEGDVYTC
TVEHEALQNPDTKTWEVDVELPSVGPAVFCGVGLAVGLLGVATGTFFLVKGNQCN
NT seq 708 nt   +upstreamnt  +downstreamnt
atgaagttatttctgatcttgttcacactgatgtgtgtgaaggacactggagctcagagt
aaacacactcaaattgaactgatcgaatgctcagacacggataaagagtatatgataggg
accgatggagaagagcagttttatgtagattttgagaagaaggagggggtggtcatgctg
cccncgttcgctgatccgatcagttaccccggacagtacgcgttcgccgaggctaatatg
cccatctgcaaacaaaacttagacgtgtggaaacaagactttaaagatcagccggtgcca
aaggatcccccacaaagctccatctatcccaagcaaaagatgcagttggggtcacagaat
ctgctcgtctgtcacttcacacgatttttccctccacatgtgactgtacgatggaccaaa
aacaacgtggatgtgacagagagctccacactcagtcgttactaccctaatgaagacaac
acctacaaccagttctcccacctgctcttcactccacaggagggagatgtttacacctgc
actgtggagcacgaggcgctgcagaaccctgacaccaagacatgggaggtggatgttgag
cttcccagtgtaggtcctgctgtgttttgtggagtgggtctggctgtgggtctgctggga
gtcgctactggaactttcttcctggttaaaggaaaccagtgtaactga

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