Silurus meridionalis (southern catfish): 124400170
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Entry
124400170 CDS
T08004
Symbol
nkx3-1
Name
(RefSeq) homeobox protein Nkx-3.1
KO
K09348
homeobox protein Nkx-3.1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124400170 (nkx3-1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124400170 (nkx3-1)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124400170
NCBI-ProteinID:
XP_046727770
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All DBs
Position
17:4201590..4202768
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AA seq
214 aa
AA seq
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MASSNRPLTSFFIEDILSMREEKGDETIGSSAEGQSDSRCCKVRGESHDPLLIEEFSRSP
ASPDDSCTTERTSSPTDATADADEPSHAQTLAQKQKRSRAAFTHLQVLELEKQFSRQRYL
SAPERAHLASALRLTETQVKIWFQNRRYKTKRRQQLDCCRKSGGNVVGGAAAAAVAAEED
FLRASLLATVYACYPSRPRVYDPHGLGAWRPTVW
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcaaacaggccgctgacgtctttcttcattgaagacatcctgtctatgaga
gaggaaaagggggacgagacgatcggaagttcagctgaaggccagagcgactcacggtgt
tgtaaagtgagaggagaatcccacgaccctctcttgatcgaggagttctcccggagccct
gcttcgcccgacgactcgtgcacgacggaaaggacgagctcgccgacagacgcgacggcc
gacgccgacgagccgagccacgcgcagactctggcgcagaagcagaagcgctcgcgcgcc
gccttcacgcacctgcaagtgctcgagctggagaagcagttcagccgccagcgctacctc
tccgcgcccgagcgcgcgcacctggcctccgcgctgcgcctcaccgagacccaggtgaag
atctggttccagaaccggcggtacaaaaccaagcggaggcagcagctggactgttgccgc
aagtcgggaggaaatgtcgtggggggagcagcagccgccgcagtcgcggccgaggaggac
tttctcagagcgtcgctgctcgccacggtgtacgcgtgctacccaagtcggccgcgcgtg
tacgatccacacggactgggcgcgtggaggcccactgtgtggtga
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