Silurus meridionalis (southern catfish): 124401370
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Entry
124401370 CDS
T08004
Name
(RefSeq) exostosin-1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
smeo01100
Metabolic pathways
Module
smeo_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124401370
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124401370
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
124401370
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
124401370
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124401370
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
124401370
NCBI-ProteinID:
XP_046729602
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Position
18:25824810..25952197
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AA seq
730 aa
AA seq
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MQAKKRYVLALAAACATLLAYICTLHTTEIQAHSDELPFYTLLNHAEQPYLYLEEVEPEE
YGPLMLLRREIQNNMYKSRRCRMDTCFDFGRCQGAFRVYVYPPGTSTVTGISENYRKILA
AIEDSRFYTNDPSEACLFVLSVDTLDRDRLSPQYVQDVRTQIQNLPLWNDGRNHLIFNLY
SGTWPDYAEDLGFDVGQAMLAKASVDVQNFRPHFDVSIPLFSKDHPQKGGEKGFLASNNV
PPARKYLLVFKGKRYLTGIGSETRNALYHIHNGEDMILLTTCKHGKDWEKHKDTRCDQDN
EEYSKFDYQELLHNSTFCLVPRGRRLGSFRFLEALQAACIPVLLSNGWELPFSEVIDWSK
AAIIGDERLLLQIPSITRSVNAEQILALRQQTQFLWDSYFSSVDKIVLTTLEIIQDRIYI
YTSRSMLMWNSLPGGLYTLPRFSSYPTLFPFYYGLLGKTPQQEFTAVIQALAPLQSPQQP
IFKLILAVAKSRFCAQIVVLWNCDKPSPPKSKWPSISVPLTVIEEERKTMSRRFFPHDVI
GTDAVLSLDEDSVLSTNEVDFAFIVWYSFPERIVGYPARSHYWDTAKGRWGYTSKWTNEY
SMVLTGAAFYHRYYHFLYTHYLPSRLLSMVDQLANCEDILMNFLVSTVTRLPPIKVTQKK
QYKETMMQQGSKPSRWADPDHFAQRQSCMNSFAAWFGFMPLVHSQLRLDPVLFKDQVSIL
RKKYRDIERL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaagaagcgctacgtgctagcgttggcggcggcttgcgccacgctgctcgct
tacatctgcactctgcacaccaccgagatccaggcgcacagcgacgagctgcccttttac
acccttctcaaccatgccgagcagccgtacctctacttggaggaggtagaaccggaagag
tacggaccgctgatgctgctgcggcgcgagatccaaaacaacatgtacaagagccggcgc
tgtcgcatggacacctgctttgacttcggtcggtgtcagggtgcttttcgggtctatgtg
tacccgccaggcacgagcacggtcactgggatttctgagaattaccggaaaattctggcc
gccattgaggactcacggttctatacgaacgatccaagcgaagcgtgcctttttgtgctt
agtgtggacacgctggaccgtgacaggttgtcaccacaatatgtgcaggatgtcagaact
cagattcagaaccttccactgtggaatgatggaagaaaccacctgatctttaacctgtac
tctggaacatggcccgactatgctgaggatttgggttttgatgtaggccaggccatgttg
gccaaagccagcgtcgacgtgcagaacttcaggccccatttcgatgtctccataccactt
ttttccaaagaccacccccagaaaggtggcgagaaaggttttttggcatccaacaatgtc
ccgcctgcacggaaataccttctggtgttcaagggaaagaggtacctgacaggaattggt
tcggaaaccaggaacgctttgtatcacatacataatggggaagatatgattttattgacc
acctgtaagcacgggaaagactgggagaagcacaaagacacgcgatgtgaccaggataat
gaagaatactcaaaatttgattaccaggagctgctgcacaactcaactttctgcctagtg
cctcgtggccggcgactcggatctttccgtttcctcgaagccctgcaggcagcgtgtatc
cctgtattactgagtaacggatgggagctgcctttctccgaggtcatcgactggagtaaa
gctgctatcatcggagatgagagattactattgcagattccctctatcaccaggtccgtg
aatgctgagcaaatcctggctctgagacagcagacgcagttcctgtgggactcctacttc
tcctcagtggataaaattgtcttaaccacattagagatcatccaggacaggatatacatc
tacacctcaagaagcatgctgatgtggaactctctcccaggtggactctacacactccct
cggttttcctcgtatcccacccttttccccttttactacggcctcctcggtaagactcca
cagcaggagttcacagctgttattcaggccctggctcctcttcagtctcctcagcaaccc
atcttcaaacttatcctcgctgttgccaagtccaggttctgtgctcagatcgtcgtgctg
tggaactgtgacaaaccttcaccccccaaaagcaaatggccgtctataagcgtccctctg
accgtaattgaggaggaaagaaagaccatgagcagacgctttttccctcatgacgtcatc
gggaccgatgccgtgctcagcttggacgaggactcagtgctgtccacaaatgaggtggat
tttgccttcatcgtgtggtacagttttcctgagcggatagtgggatatccagcacgcagt
cattactgggacacagccaaggggaggtggggctacacgtccaaatggaccaatgagtat
tcgatggtgctgacgggcgccgccttctaccacaggtattatcacttcctgtacactcac
tacttacccagtcggctgctctccatggtggaccagctcgccaactgtgaggacatcctc
atgaacttcctagtctccacggtaaccaggttgccgccaatcaaagtcacgcagaagaaa
cagtacaaggagacgatgatgcaacaggggtcgaagccgtcgcgttgggccgacccggac
cacttcgcccagcgccagtcctgcatgaactcctttgccgcctggttcggcttcatgccg
ctcgtccactctcagctccgcctggatccggttctgtttaaagaccaggtgtccatctta
cgcaagaaatacagagacatcgagagactgtag
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