Silurus meridionalis (southern catfish): 124401487
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Entry
124401487 CDS
T08004
Symbol
nrl
Name
(RefSeq) neural retina-specific leucine zipper protein
KO
K07595
transcription factor MAFA
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124401487 (nrl)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Maf
124401487 (nrl)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_Maf
Maf_N
bZIP_2
KASH_CCD
bZIP_1
DUF834
Prp19
Motif
Other DBs
NCBI-GeneID:
124401487
NCBI-ProteinID:
XP_046729803
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Position
18:23084338..23094066
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AA seq
417 aa
AA seq
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MSSPSIPLPPLPPSPLAMEYLNDFDLLKFESKADSPPPPQTCSYPKEVQQQQDPSSSPYV
VQAPLDSSLSSSPYTSLPPSPTLSDAHPLPSASSASSSSISIPLSISASYVSGFSSTSQG
SLDCSPAPGVPGQCPNPTSLEDLFWLAAIQQQFGGDPSLIEALGGTPERVDRDRGVVGGF
LGCEDAVEVLLNSAAAAVSSQFPVLSQSSGSSNLGDSSSDSGGDVKAPELCHRPLLFVSS
GLPSLHNGNPTQGTYHQPSSPSSRLHHPQHHHHHHHHPHHLINSHHAHHHHQLQTGQSGL
DDRFSDEQLVSLSVRELNRHLRGVSKDEVVRLKQKRRTLKNRGYAQSCRYKRLQHRHALE
SEKHILTQQLDQLQCELSRVLRERDAYKARYEKLVNSSEAPPTQTNNPPTPPTDYFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccttccatccctcttcccccgttgccccccagccctctggccatggaatac
ttaaacgactttgacctgctcaagtttgaatcaaaagctgactcccctccccctcctcaa
acatgctcttatccaaaagaagtccagcagcaacaggacccctcttcatccccctatgtg
gttcaagcccctctggattccagccttagctccagcccttacacttctctacctccttcg
ccaaccctcagcgatgctcatccgctcccatctgcctcttctgcctcctcctcttcgata
tccatccctctctcaatctctgccagctatgtctcaggatttagttcgacctcgcaaggg
agtctggactgcagccctgcaccaggtgtcccaggccaatgtccaaaccccacatctttg
gaagatttgttctggttggcagcaatccagcagcagtttggaggggatccttctctaata
gaggccttaggaggaacaccagagagagttgacagagacaggggggtcgttgggggattt
ctggggtgtgaagatgcagtggaggtgctgctgaactctgctgccgcggctgtgagctca
cagttcccagttctctctcaaagctctgggagcagtaatctaggagactcaagcagtgac
agtggaggtgatgtaaaagcccccgagctgtgtcaccgtcctctcctctttgtttcctcc
ggtcttccatcgcttcacaatggcaatccaacacaaggcacgtaccatcagccttcaagc
ccatcatcccgccttcatcacccacagcatcaccatcatcatcaccatcacccccatcat
ctcattaacagtcatcatgctcaccatcatcatcagctccaaactggccagtctgggttg
gacgatcgtttttcagacgagcagctcgtgagcctgtccgtgcgcgagctgaacaggcac
ctgcgcggcgtgagcaaagacgaggtggtgcgcctgaagcaaaaacggcgcaccctgaag
aaccgagggtacgctcagtcctgccgttacaagcgattgcagcaccggcatgcactcgag
tctgagaaacacatcctcactcagcagctggatcagctgcagtgcgagctgtctcgcgtg
ctgagagagcgcgacgcctacaaggctcgttacgagaagcttgttaactccagcgaggcc
ccgcccactcagaccaacaacccacctactcctcccacggactatttcctctga
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