KEGG   Silurus meridionalis (southern catfish): 124401508
Entry
124401508         CDS       T08004                                 
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform X1
  KO
K04687  interferon gamma
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03050  Proteasome
smeo04060  Cytokine-cytokine receptor interaction
smeo04217  Necroptosis
smeo04350  TGF-beta signaling pathway
smeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    124401508 (ifng1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    124401508 (ifng1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124401508 (ifng1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124401508 (ifng1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124401508 (ifng1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:smeo03051]
    124401508 (ifng1)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:smeo04052]
    124401508 (ifng1)
   00536 Glycosaminoglycan binding proteins [BR:smeo00536]
    124401508 (ifng1)
Proteasome [BR:smeo03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    124401508 (ifng1)
Cytokines and neuropeptides [BR:smeo04052]
 Cytokines
  Interferons
   124401508 (ifng1)
Glycosaminoglycan binding proteins [BR:smeo00536]
 Heparan sulfate / Heparin
  Cytokines
   124401508 (ifng1)
SSDB
Motif
Pfam: IFN-gamma DUF885 DUF688 DUF2746 DUF7370
Other DBs
NCBI-GeneID: 124401508
NCBI-ProteinID: XP_046729844
LinkDB
Position
18:complement(9012771..9014730)
AA seq 178 aa
MTLYWRICIVFFGMIAYSVAFLPKNIKESIDHLNNHYVRKNPNPGKLYDGHSLFLDKLKD
KTFEEGEQKLLMTIILDAYHRILAKMENETLDENLKHDLHEVKEQMSKLKEHYFSGKHAD
IKKYVTELLALKENDPRVQSKAIFELKTIYNRAAHLGSQSAENHRRRRQAKGSKKQRS
NT seq 537 nt   +upstreamnt  +downstreamnt
atgactctatactggagaatatgcattgtcttttttggaatgatagcatactcagtggct
ttcctcccgaagaacatcaaggagtctatcgaccatctgaataatcactatgtaagaaaa
aaccccaaccctggcaaactgtatgatggacattccctctttctagacaaactgaaggat
aaaacttttgaggagggggaacagaagctcctaatgacgattattctggatgcataccac
agaattttagcaaagatggagaacgagactctggatgaaaatttaaagcatgacttgcat
gaagtaaaagaacaaatgagcaagttgaaagaacactacttctctggcaaacatgcagac
atcaagaaatatgtcactgagctccttgctcttaaggaaaatgacccacgtgtccagagc
aaagcaatttttgagctgaaaaccatctataatagggcagcacacctgggcagccagtca
gcagagaaccaccggagaagacgtcaagctaaaggctccaaaaagcagcgatcatag

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