Silurus meridionalis (southern catfish): 124401508
Help
Entry
124401508 CDS
T08004
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 isoform X1
KO
K04687
interferon gamma
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
smeo04060
Cytokine-cytokine receptor interaction
smeo04217
Necroptosis
smeo04350
TGF-beta signaling pathway
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124401508 (ifng1)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124401508 (ifng1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124401508 (ifng1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124401508 (ifng1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124401508 (ifng1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124401508 (ifng1)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124401508 (ifng1)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124401508 (ifng1)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
124401508 (ifng1)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Interferons
124401508 (ifng1)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Cytokines
124401508 (ifng1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFN-gamma
DUF885
DUF688
DUF2746
DUF7370
Motif
Other DBs
NCBI-GeneID:
124401508
NCBI-ProteinID:
XP_046729844
LinkDB
All DBs
Position
18:complement(9012771..9014730)
Genome browser
AA seq
178 aa
AA seq
DB search
MTLYWRICIVFFGMIAYSVAFLPKNIKESIDHLNNHYVRKNPNPGKLYDGHSLFLDKLKD
KTFEEGEQKLLMTIILDAYHRILAKMENETLDENLKHDLHEVKEQMSKLKEHYFSGKHAD
IKKYVTELLALKENDPRVQSKAIFELKTIYNRAAHLGSQSAENHRRRRQAKGSKKQRS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgactctatactggagaatatgcattgtcttttttggaatgatagcatactcagtggct
ttcctcccgaagaacatcaaggagtctatcgaccatctgaataatcactatgtaagaaaa
aaccccaaccctggcaaactgtatgatggacattccctctttctagacaaactgaaggat
aaaacttttgaggagggggaacagaagctcctaatgacgattattctggatgcataccac
agaattttagcaaagatggagaacgagactctggatgaaaatttaaagcatgacttgcat
gaagtaaaagaacaaatgagcaagttgaaagaacactacttctctggcaaacatgcagac
atcaagaaatatgtcactgagctccttgctcttaaggaaaatgacccacgtgtccagagc
aaagcaatttttgagctgaaaaccatctataatagggcagcacacctgggcagccagtca
gcagagaaccaccggagaagacgtcaagctaaaggctccaaaaagcagcgatcatag
DBGET
integrated database retrieval system