Silurus meridionalis (southern catfish): 124402367
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Entry
124402367 CDS
T08004
Symbol
prkcdb
Name
(RefSeq) protein kinase C, delta b
KO
K06068
novel protein kinase C delta type [EC:
2.7.11.13
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04140
Autophagy - animal
smeo04270
Vascular smooth muscle contraction
smeo04621
NOD-like receptor signaling pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124402367 (prkcdb)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124402367 (prkcdb)
04625 C-type lectin receptor signaling pathway
124402367 (prkcdb)
09152 Endocrine system
04912 GnRH signaling pathway
124402367 (prkcdb)
09153 Circulatory system
04270 Vascular smooth muscle contraction
124402367 (prkcdb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124402367 (prkcdb)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.13 protein kinase C
124402367 (prkcdb)
Protein kinases [BR:
smeo01001
]
Serine/threonine kinases: AGC group
PKC family [OT]
124402367 (prkcdb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PKC_C2
PK_Tyr_Ser-Thr
C1_1
Pkinase_C
C1_2
zf-RING-like
Kinase-like
ABC1
PHD
Pkinase_fungal
Zn_ribbon_TiaS
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
124402367
NCBI-ProteinID:
XP_046731312
LinkDB
All DBs
Position
19:complement(15162339..15184409)
Genome browser
AA seq
684 aa
AA seq
DB search
MAPFLRISFTEYSLGTLPPLPDAPFCAIKMKESLTTERGKTLVQRKPTMYPEWKSTFDAH
IYEGRVIQVLLMKTAEEPLSEATVGVSVLAERCKKGNGRAEFWVDLQPSGKVMMSVQFFV
EDNDSESKASISEKEEDGILTLKRRRGAIKQAKVHFIKNHEFLATFFKQPTFCSVCREFV
WGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTATNSRDTVFQKERFKIDMPHRFKTHNYM
SPTFCDHCGSLLWGMVKQGLKCEDCAMNVHHKCQTKVANLCGINQKLLAEALNQVSLKSS
TKRPDPTLSDIGIYQDIAKNVPLDPSGDLNKLWDGHTPTPSTIPHQTHSTYLSIDQFEFH
KVLGKGSFGKVLLAELKGRGEFFAVKALKKDVVLMDDDVECTMVEKRVLALAWENPFLTH
LYSTIQTKEHLFFVMEYLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR
DLKLDNVMLDKDGHIKIADFGMCKENVFGEHRATTFCGTPDYIAPEILLGQKYTFSVDWW
SFGVLIYEMLIGQSPFQGDDEDELFESIRMDTPHFPRWITKEAKDLMEKLFEREPTRRLG
VVGNIRGHPFFKTINWIVLEKREVTPPFKPKVKSPSDCSNFDREFLSEKPRLSQGDKNLI
DSMDQSAFAGFSFINPTMESILGK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctccgttcctgcggatctcctttaccgaatatagtttgggaacgcttcctcctttg
cccgatgcaccgttttgtgccatcaaaatgaaggagtctctcaccacggagcggggaaag
actctggtccagaggaagcccaccatgtaccccgaatggaagtccaccttcgatgctcat
atctacgaaggccgtgtgatccaggttctcctgatgaagacggccgaagagcctctctcc
gaggccacggttggcgtatcggtgctcgccgagcgctgcaaaaagggcaacggccgagca
gaattctgggtagacctgcagccctctggaaaggtcatgatgtctgtgcagttctttgtt
gaagataatgactcggagagcaaagcgtcaatcagcgagaaggaagaggacgggatttta
acactgaaacgacgaagaggagccatcaaacaggccaaggttcacttcatcaaaaaccac
gagttcctcgccacctttttcaaacagccgacgttttgctccgtctgccgagagttcgtc
tggggacttaataaacagggctacaaatgcagacaatgcaatgcggccattcacaagaaa
tgcattgataagatcatcgggagatgcacaggaacggcaaccaacagccgagacaccgtg
ttccagaaagagcgcttcaagatcgacatgccacatcgcttcaagacacacaactacatg
agtcctaccttctgcgatcactgtggaagtctgctatggggaatggtcaagcaaggtctg
aaatgtgaagattgtgcgatgaacgtccaccacaaatgccagactaaagttgccaacctc
tgtggtataaaccagaaacttctagccgaagccctgaatcaagttagcttgaaatcctcc
acaaagcgcccggatcccactctatcggacatcggcatctatcaggatatagccaaaaat
gtaccgctggacccaagtggagaccttaacaaactgtgggacggtcacactcccacacct
tccaccattccacaccaaacacattccacatacctgtccattgaccagtttgaattccac
aaagtgttgggtaaaggcagctttggcaaggtgctgctggcagagctgaagggccggggc
gagttctttgcagtgaaggcgctgaagaaggacgtggtgctaatggacgatgacgtggag
tgcacgatggtggagaaaagggtgttggcgttagcctgggaaaaccccttcctcacgcac
ctctactccaccatccagaccaaggagcacttattcttcgtgatggagtatctaaatgga
ggagatttgatgtttcacattcaggacaaaggcagatttgatctatacagagctacgttt
tatgctgctgaaattgtttgcggcctgcagttccttcattccaaaggcattatatacagg
gacctgaaactggataatgtgatgttggacaaagacggccacattaagattgcagacttt
ggcatgtgtaaggagaatgtattcggagagcatcgtgccaccactttctgtggaacaccc
gattacatcgcaccagagatcttactagggcagaaatacacattctcagtggactggtgg
tcattcggagtgcttatttacgagatgctgattggccagtcaccgttccaaggtgacgat
gaggacgagctgtttgagtcgatcaggatggacacgcctcatttcccacgctggatcacc
aaggaggccaaggacctgatggaaaagttattcgagcgagagccgacccgccgacttggt
gttgtgggaaacattcgtggacatcccttcttcaagacaattaactggattgtcctggag
aagcgagaagtgactccccccttcaagcctaaagtgaaatctcccagcgactgcagcaac
ttcgaccgcgagttcctgagcgagaagccccgcctctcccaaggcgacaagaacctgatc
gactccatggaccaatcggcgttcgccggtttctcgttcatcaaccccacgatggagtcc
attctggggaaatga
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