Silurus meridionalis (southern catfish): 124402754
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Entry
124402754 CDS
T08004
Name
(RefSeq) anti-dorsalizing morphogenic protein
KO
K21283
bone morphogenetic protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124402754
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124402754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124402754
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124402754
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Transforming growth factors (RSTK binding)
124402754
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Morphogens
124402754
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
DUF2202
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
124402754
NCBI-ProteinID:
XP_046731918
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Position
20:6924723..6926774
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AA seq
416 aa
AA seq
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MPRCSLSKTFFIRIDLDTPVDMLASAVFFTIAFLVGLGSSRPSLVSLGDRFSVENESREV
RLAAIKRLLEVFGMEDPPASQGRGHKQPPQYMLDLYNTVADVDGVTKDPTLLAGNTVRSF
FDKLHSQQVEFMFNLSTVARNEKVLTAELHLFKLRPQASLTFNRHHFCQVSVYQLLDNTK
LNVSHGKKLVSSRLIPVHSNGWEVFTITQAVRTWMVDATSNLGLLVTIRTLAGIQLDMRT
VRFASGQNHHHSKQPMLVLFTDDGRRVASPEGALKGSDDSLASPKLPLPSLTLSGPGHRS
ARSLDYDEDPERTCQRLPLYVDFEEIGWSGWIVSPRGYNAYHCKGSCPFPLGQNMRPTNH
ATVQSIINALKLTKGIETPCCVPDKLFSINLLYFDDDENVVLKQYDDMVAGSCGCH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtgttcactcagcaagacgttcttcataaggatcgacctcgatacgccggtc
gatatgctcgcctccgccgtcttcttcaccatcgccttcttggttggcctgggaagctcc
aggccttctcttgtatcattaggagaccgcttttctgtggaaaacgagtcgagggaagtc
cgcttggccgccattaagcgccttttggaggttttcggcatggaagatcctcctgcttct
cagggtcgaggccacaagcagcctcctcagtacatgctcgatttgtacaacacggtggcg
gatgtggacggggttaccaaagaccctactttactagctggaaatacagtccgaagtttc
tttgacaaattacacagccaacaggtcgagttcatgttcaacttgtccaccgtggccaga
aatgagaaggttcttacagcagagctgcatctgtttaaactgaggcctcaagcatcactc
actttcaacagacatcacttctgtcaggtcagtgtttatcagcttctcgataacaccaaa
ctgaacgtctcacacggaaagaagctcgtgtcttcgagactcattcctgttcattcgaac
ggctgggaagttttcaccatcacacaagcggttcgcacatggatggtggatgcaaccagc
aacctagggctcctggtgaccatccggactctggcagggattcagctggacatgcggact
gtgcgttttgcctcagggcaaaatcaccatcacagtaagcagcccatgctggttctcttc
actgatgatggcagacgtgtcgcctctccagaaggtgctctaaaaggttctgatgattcg
ctggccagtcccaagctccctctgcccagcctgacactctcgggccctgggcatcgtagt
gctcgctcccttgactatgatgaagacccagaaagaacatgccagagactgccactgtat
gttgactttgaggagattggctggtctgggtggattgtgtctccccgtggctacaatgca
taccactgcaaagggtcttgtccctttcctctgggccagaacatgagacccaccaaccat
gccactgttcagtccattatcaatgcactcaagcttaccaagggcattgagacaccgtgt
tgtgtgccagacaagctcttctccattaacctcctgtacttcgatgatgatgagaatgta
gtgcttaaacagtatgacgacatggtcgccggaagctgtggttgccactaa
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