Silurus meridionalis (southern catfish): 124402903
Help
Entry
124402903 CDS
T08004
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124402903 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402903 (pbx1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124402903 (pbx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
GAIN
LZ3wCH
EF-hand_2
Motif
Other DBs
NCBI-GeneID:
124402903
NCBI-ProteinID:
XP_046732276
LinkDB
All DBs
Position
20:879170..933967
Genome browser
AA seq
429 aa
AA seq
DB search
MEEQPRLMHPHGVGLAGHPGLTHRPPDVTAGSDGDSRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQDEEPPDPQLMRLDNMLLAEGVSGPEK
GGGASAVAAAAAAAVGGTGNDNSVEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVNIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNAASASAQGSQANSPSTPNSAGSAASFNMSHSGDLFMSVQSLNGDSYPAP
QVGANIQSQVDTLRHVISQAGGYTDALTATQLYSPQGINANGVWQDAPTPSSVTSPTEGP
GSVQSDTSN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagccgcggttgatgcaccctcacggcgtgggcttggccggtcacccgggc
ctcacgcaccgtcccccggacgtgaccgcgggaagcgacggcgactccaggaagcaggac
atcggggacattttacagcagatcatgaccataacggaccagagtctggatgaagctcag
gccaggaaacacgctctgaactgtcaccgcatgaaaccggcactcttcaacgttctgtgt
gaaattaaagagaaaacagtgttaagtattcgcggcgcacaggatgaagaaccccccgat
cctcagctcatgcgactggacaacatgctcttagcggagggtgtgtctggaccagagaaa
gggggtggagcttcagcggtcgctgcagcagctgcagccgcagtgggtggaaccggaaac
gacaactcggtggagcattcagactacagagcaaaactgactcagatacgacagatctac
cacactgagctggagaaatacgagcaggcgtgtaacgagtttaccacacacgtgatgaac
ctgttgagagagcagtcgcgcacacgtcccatttcccccaaagagatcgagcgcatggtc
aacatcatccaccgcaaattcagctccatacagatgcaactcaaacagagcacgtgcgaa
gccgtcatgatcctgcgctcgcgcttcctagacgccaggcggaaacggcggaacttcaac
aagcaagccacagagatcctgaacgagtatttctactcgcacctcagtaacccgtatccc
agcgaggaagccaaagaggaactggccaagaagtgttccatcaccgtctcccaggtgtcc
aactggttcgggaacaagcggataaggtacaagaaaaacatcggaaaattccaggaggaa
gcgaacatgtacgccgccagaacggctgttaacgctgccagcgcctctgctcagggcagc
caagcaaactcgccatccacgcccaactcagccggttctgctgcatcttttaacatgtct
cactccggcgatttgttcatgagcgttcagtctctgaacggggactcgtacccggcgccg
caggtgggcgctaacatacagtcacaggtggatacacttcgccatgttatcagtcaagca
ggaggatacactgatgctctcactgccactcagctctacagtccacagggcatcaacgcg
aacggtgtttggcaggacgctccgactccgtcgtccgtaacttcacctacagaaggaccc
gggagtgttcagtctgacacgtctaactaa
DBGET
integrated database retrieval system
