Silurus meridionalis (southern catfish): 124402959
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Entry
124402959 CDS
T08004
Symbol
znf407
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402959 (znf407)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124402959 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_2
Zf-C2H2_ZNF451_C
zf-BED
zf-C2H2_REST
C2H2-zf_KIN17
AT_hook
DUF2719
Motif
Other DBs
NCBI-GeneID:
124402959
NCBI-ProteinID:
XP_046732397
LinkDB
All DBs
Position
20:15084032..15096388
Genome browser
AA seq
1401 aa
AA seq
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MASNYTYSSCFVKWFLNTEDMDRLQRKLRSRKATSEERPENKDDNGQNKGTPSPSERTHT
VVSKEENNGRACRECDFVAKTPTALKIHCRRKHNSSKSEGATGAAEKVAEEKSSTDEPKS
STPPTDSPHIDQLSSGVTTINSPSSAAPPIDHRSSDVASIDPISSAVPPIDHISSGVAPS
DTLSSAAPPIDYHSFGVASIDLISSAAAPIDHHSSSVTPIDPLSSVTAPNEQLSTETPPV
EQLSSGILGIPAIDQLDSGTQRFERLYCRCCSFYTCTVEEMNAHLSDESHLNLTAEKKIG
PLFEQCVEKVLVILSDEPKSADVQREHDEGVSECATEDAEGMEPAERASSEVADASDSHK
RKRGRPKSSQVISCSHCGLVASNPTNLSVHIRRKHSRLYGFHCKLCDYSCVTKGDMDRHC
ETKKHIKRVQSDGDGQEAVITLNPEQTAQSGEKTPNAPDTETQETANVEQKGEAEETGSD
PPCKKPKYDSVYSCIHCYFVAHSALSLALHVRRKHTRDFEFVCLACSYYAVTRREMSRHT
ATEKHKFKRQRYLNKTHQPDAEKLDENASRQAESGNLSDGANKENAQQNPDNAHQHNKHS
NTDTERASGVNDAKNDEGKGSGGEEELNRTPQLKSGEDTNSSKDSEFADPSNAEEGDEEY
NNDDEEDEEQEDEDVCDTDGESPSSEGRVCRSTAFDECVFSLKRPADGPHDKDDGEAYIS
LQQAAKMLKMLEGQEVSTRVRCGDCGFLAEGLSGLNVHIMMKHSSKEKPFHCLLCGKSFH
SDSSLQQHLSSSAHVRTERGSVDERPDGGTIFRCVRCNEHCSSEQELFXHIKEKHEELLR
EVNKYVMEDTEQINREREENPGNVCKYCGKVCKSSNSMAFLAHVRTHTGSKPFMCKICNF
ATAQLGDARNHVKRHLGMREYKCHLCGWAFVMKKHLNTHLLGKHGLGQPKERKYDCELCE
RSFSEKWALNNHMKLHTGDKPFKCPWSSCHYAFLTHSAMKDHYRTHTGEKSFLCDLCGFA
GGTRHALTKHRRQHTGERPFRCDLCSFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCA
ENIRKHILHTGKHEGVMMYNCPRCDFCTNSPSEFRNHLKDKHIDIENPDLAYLHAGIVSK
SFECRLKGQGSTYVEADAPFMPDEGRLGAETLQQVIIIQGYGEEAELQGTEMEEAELEES
AAATLQTLAMSSVNGELLQVTQDGSIIPYTHKNYVLVESSGSGAEQTLQMAEKALHEANP
DGTAPSTALDALLCAVSEIDQQDGATQQDIRTTQQQVHAQGEGQEAVQVYGEVVRVLGHA
PDEVLQFAASQLMMREGLTQVIVNDEGTHYIVTEVAEGDVYAQSEGVVSGQEVGLVDDSG
NQSGEAQVTYDPVSLKQDAQE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaactatacatacagtagttgctttgtgaaatggtttcttaatactgaagac
atggatcgtttgcagaggaagttacgatcaaggaaagcgacgagcgaggagcggcctgag
aataaagacgataatggtcaaaataaaggaactccgagtccaagtgaacgcactcacact
gtagtctctaaagaggagaataacgggcgtgcgtgtcgtgagtgcgattttgtggctaaa
actcctactgctctgaaaatccactgcaggaggaaacacaatagctctaaatctgagggt
gcgacaggtgcagctgaaaaggttgcggaggagaaatcatctacagacgaaccaaaatca
tcaacgccccctactgactcgccccatatagaccagctcagctctggtgtaaccactata
aattcacccagctctgcagcaccccctatagaccaccgcagttctgatgtagcctctata
gatccaatcagctctgcagtacctcctatagaccacatcagctctggtgtagccccttca
gatacactcagctctgcagcaccccctatagattaccacagctttggtgtagcctctata
gatctaatcagctctgcagcagccccaatagaccaccacagctctagtgtaacccctata
gatccactcagctctgtaacagcccctaacgagcagctcagtacagagacaccccctgta
gagcagctcagctctggtatacttggtatacctgcaatagaccagctcgacagtggaaca
cagcgttttgagcgtctgtactgcaggtgctgcagtttttacacttgcacggtcgaggag
atgaacgctcacctgagcgacgagtcacacctcaacttgacggcagagaaaaaaatcggc
ccgctgttcgagcagtgcgttgaaaaagtgcttgttattttatcggacgaaccaaaaagc
gcagacgtgcagcgcgaacacgatgaaggcgtcagcgaatgtgccaccgaggacgctgaa
gggatggaacccgccgaacgcgcttcatcagaggtagcggacgctagtgattcgcacaaa
cggaaacgcggaaggcccaagtcatctcaggtaataagctgcagtcactgcggcctcgtg
gcatccaatcccacaaacctgagcgtgcacatccggcgcaaacacagccgcctatatggc
ttccactgcaaactgtgtgactactcgtgcgtgaccaaaggagacatggaccggcactgt
gaaaccaaaaagcatattaaacgtgtgcagagcgacggcgacggacaggaggcagtcatc
acactaaatccagagcagactgctcagagtggcgaaaaaacgcccaatgcaccggacact
gaaacgcaggaaacagcaaatgtagaacaaaaaggcgaggcagaggaaaccggaagtgac
cctccctgcaaaaaacccaagtacgactcggtgtactcgtgcattcactgttacttcgtc
gctcattctgcgctgtcgctagccctacacgtgcgccgcaagcacacccgggatttcgag
ttcgtgtgcttggcgtgcagttattacgcagtgacccgcagagagatgtcccgccacact
gcaaccgagaaacacaaattcaaacggcagcgatacctcaacaaaacgcaccaacccgat
gcggagaaactcgatgagaacgcaagccgacaagctgaatccgggaacctatcggatggc
gccaacaaagaaaacgctcagcaaaatcctgacaacgctcaccaacacaacaagcattcg
aatacagatacagaacgagcctccggtgttaatgatgcaaaaaatgacgaaggaaaagga
agtggtggtgaggaagagctgaataggaccccacagctgaagtccggtgaagacacaaat
agctcaaaggactcagagtttgctgatccatcaaacgcagaggaaggtgacgaggaatac
aataacgatgacgaagaagatgaggaacaggaggatgaggacgtgtgcgatacagatggt
gaaagtccctccagtgagggccgcgtgtgcagatcgacggcgtttgacgagtgcgtcttt
tccttaaaacggccagcagatggaccgcacgacaaagacgacggagaggcgtacatatcc
ctccagcaggctgcgaagatgctgaaaatgttggagggacaagaagtgagcacgcgggtc
cgttgtggcgattgcggcttcttggcggaggggctcagcggcttgaacgtccacatcatg
atgaaacactcatcaaaggagaaaccctttcactgcctgctctgtgggaagtcgtttcac
tcggacagcagcctgcagcagcacctgagtagctcggcgcacgtgcggacggagcgcgga
agcgtggacgagcggcccgatggaggcaccatctttcgctgtgtgcgctgcaatgagcac
tgcagctcggagcaagagctgttcnttcacattaaagagaaacatgaggagctgctgcgc
gaggtcaacaagtacgtgatggaggacacggagcagatcaaccgtgaacgtgaggagaac
cctgggaacgtgtgcaaatactgtggcaaggtgtgcaagagcagcaactccatggccttc
ctcgctcacgtccgcacacacacaggttcaaagccattcatgtgtaagatctgtaatttt
gcaacggcccaactcggagatgccaggaatcacgtgaagagacatctcggcatgagagag
tacaagtgtcacctctgtgggtgggctttcgtgatgaagaaacacctgaacactcatttg
ctgggaaaacatggactaggccagccaaaagagaggaagtacgattgtgaactgtgcgag
cggagttttagcgagaaatgggcccttaataaccacatgaagcttcacactggagacaaa
ccctttaaatgcccttggtcatcttgtcactatgcctttctcacacactcggccatgaag
gaccattacaggacgcatacgggtgaaaagtcatttctgtgtgatctctgcggtttcgct
ggtggaactcgtcacgctctcactaaacaccggcgccaacacacaggtgagcgtccgttc
cgttgtgacctctgcagctttgcctcgaccactcagtcgcatttgacccgacacaaacgc
gttcacacgggggagaaaccgtatcgctgcccctggtgtgactacaggtcaaactgtgcc
gagaacatccgtaagcacatccttcatacggggaaacacgagggtgtgatgatgtacaac
tgccctcgctgcgacttctgcaccaattcgccatccgagttccgtaaccaccttaaggac
aaacacatcgatatcgagaaccctgacctcgcttaccttcatgcaggaatcgtttcgaag
tcatttgagtgccggctcaaagggcaggggtcaacatatgtggaggccgacgcccctttc
atgccagacgaagggcgtttaggagccgaaaccttgcagcaagtcattatcatccaggga
tatggtgaggaggcggagttgcagggcaccgagatggaggaggcggagctggaggagtcg
gcggcggctactttgcagactctggccatgtcctccgtcaacggtgagctgttgcaggtt
acgcaggacggatccatcattccctacacgcacaaaaactacgtcctggtggagtcgtcg
ggttcgggggcggagcaaacgttgcagatggcagagaaagcgttgcacgaagccaatcct
gacgggacggcgccgtctaccgcactagatgctctgctgtgcgccgtgtctgagatcgac
cagcaggacggcgccacgcagcaggatatcagaaccacccaacaacaagtacacgcccag
ggggaggggcaggaggcggtccaggtttacggagaggtcgtacgggtgttgggccacgcc
cctgacgaagtcctacagttcgcggccagccagctgatgatgagagaagggttaacacaa
gtgatcgtgaacgacgaaggaacgcattacattgtgaccgaggtggctgaaggggatgtg
tacgcgcagagcgaaggggtggtgtctggacaggaagtagggcttgtggatgattcagga
aaccagtccggtgaggctcaggtcacatatgatccagtcagccttaaacaagatgctcag
gaataa
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integrated database retrieval system
