Silurus meridionalis (southern catfish): 124403032
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Entry
124403032 CDS
T08004
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124403032 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124403032 (fyco1b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124403032 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
Motif
Other DBs
NCBI-GeneID:
124403032
NCBI-ProteinID:
XP_046732532
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All DBs
Position
20:3333532..3353227
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AA seq
1250 aa
AA seq
DB search
MEDHLSSRKYIGENQLQRIIRDLQDAVTELTKEHAESGEPITDDSPSLHKFSSKLEYLLQ
FDLKEKSTFMGSRKDYWDYFCDCLAKNKGTNDGIRFVKSISELKTSLGKGRAFVRYCLVH
QRLADTLQQCLMNQRVTCDWYYARSPFLKSHLNVDIINHLYELNEIQFDVASRGYDLDSE
WPTFARRTVASAVPGAHMWRPPSRCSSVNSIVSSFPQQVPDFLPGADLDLGELGELSCSA
EDDLRVELDQSELRQQRLQEQVHRLTGEASELKQEVADLQVKLLAAEKAPSLEAKVERAE
DWPKEDEKERTVAMQQVDELQATVHRLKEALSLKEQESKDMQRSLQERVDQLEEVKKKAQ
FQLDELQQQNHKSKEALDTQVASLQEQLKAKEIKLSISTQKIHQLENQSLESQSKKLDEY
KSQCVSLMEINAKLVSTVKRSEESNKELANSKAALERELTSLKAFEKQSKDKLASTGCSV
VESEKLFFEESQHLKEKTQKAEASIKEGHGPSPKESKKVFHQEQTKQTDLGKDLDLTQHS
ETGESASRLALAEAQLDLNMKEVSRLQEEVVSLQAQLQRTIEDRMKIQALQEVTEASRAD
LSAQTEQLKSQVEHLNRQNVDELLHCKEKEEVLKKQLDYETQAYANLQTEVNCMREELDG
LRMQSSALVLKNEEAKESLHRANTEIAELGIQVCTLTRQNEEAKLFCEELSTKLQKLQGQ
KKCSQTLSDSLETLKKDNSQLQEKVKEAEGLTIAMKELQKRLEGSQEDTRNLRKSNQREL
SALRLQLSEATTTHQNQMKVLNEELLGTRSQVEKEKEKVSALESRLAELEATNTSHSETL
DETKACIAKSEVLLQQKEEQLQQTQSDLAMAQEELALKQKSCQDLSENLRRMVLEKESSD
LKTSAEIDDLYRTKRNLEERLIELIREKDVLWQKSDALEFEQRLRAEEHSGRELPYCADC
RTQFSWWIHRYTCKLCGRPFCYSCCSNTVSSQQGGARERCCKDCYTRHAEAEELGSPSRG
SYSPLCSTPTRASMPSVTVAPQSFRPDDAAFDIITDEEVNCVYEGDSLLYTTALSPGSGQ
HGIHEISSSTSGGDLTPDESEELPSSVQDAEICLLKSGEVTQTVPVGLEEISNSRQEFSE
LFIKSSCYSVILITVVTAGPTISWVFSSSPKSISFSVVYRESTDIPLEQAKVLIPLTRCN
SHKETIQGQVKARNPGQYSLIFDNSFSRFISKKVQYKLSVEQTVVYDGSE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcatctttcctctcggaagtacattggtgaaaatcagctccagaggataatc
agagatctgcaggatgcggttactgagttgaccaaggagcatgcagagagtggagaacct
attactgatgacagccccagtcttcacaagttctcctccaaactggaatacctcctgcaa
tttgacctgaaagagaaatctacttttatgggcagtaggaaagactactgggactatttc
tgtgattgcttggccaagaacaaagggactaatgatggtattcgctttgtcaaatccatc
tccgagctaaagacgtcgctgggtaaaggtcgagccttcgtccgttactgtctggtgcac
cagaggctggccgacaccctccagcaatgcctgatgaaccagagagtcacatgtgactgg
tactacgcccgcagtcctttcctgaagtcccatctcaatgtcgacatcatcaatcacctg
tacgagctgaacgagatccagttcgatgtggcgtccagaggatacgacttggactccgag
tggcctacctttgccaggagaacagtggcatcagcagtgccaggtgcccacatgtggaga
cctcccagccgctgctctagtgtcaacagtatcgtcagcagcttcccgcagcaagtgccg
gattttctcccaggggcagatttggaccttggagaactcggagaactctcttgtagtgct
gaggatgacctgcgggtcgaacttgaccagtcagagttacgacaacaacgacttcaagag
caggttcaccggcttactggagaagcatccgaattaaagcaggaggttgctgatctccaa
gtgaagctacttgctgctgaaaaggcacccagtctagaggctaaagtggagagggccgag
gactggccaaaggaggatgagaaggaaagaactgttgcgatgcagcaggttgatgagctc
caagcgacggtccatcgcctcaaagaggcactgtctttaaaagagcaggagtcaaaggac
atgcaacgctcactgcaagaaagagtcgatcagctcgaggaggtaaaaaagaaagcacag
tttcagcttgatgagcttcaacagcaaaaccacaaatcaaaggaggccctagatacgcag
gttgcatcactgcaggagcagttgaaagcaaaggaaatcaagctctcgatcagcactcag
aagatccaccagttagaaaaccaaagtctggaaagccagagcaagaagctggacgagtac
aagtctcagtgtgtcagcttaatggagataaatgccaagttggttagtacggtaaagagg
agcgaggaaagcaacaaggagctggcaaattccaaagctgctctggagagagaactgacc
tctttgaaagcctttgagaagcaaagcaaggacaagttggcttccactgggtgttcagtg
gtggagagtgagaagttgttttttgaggaaagccagcatcttaaggagaaaacccagaaa
gctgaggctagtataaaagagggtcatggaccaagtcccaaggaaagcaagaaagtattt
caccaagaacaaactaagcagacagatcttggtaaagatctcgacctaacccagcactct
gaaactggagaatcagcttctagactagcattagctgaagcccaactagacctaaacatg
aaggaggtctccaggctccaggaggaagttgtcagtcttcaagcccagctccaaaggact
atagaagataggatgaagatccaagctttgcaggaggtgactgaggcctccagggctgat
cttagtgctcagactgagcagctcaagtctcaggttgagcatctaaatcgtcaaaatgta
gatgagctcctgcattgtaaggaaaaggaggaggtactgaagaagcaattagattatgaa
acccaggcttatgccaacctacagaccgaggtgaactgcatgagggaggagctggatggg
ctgaggatgcagagtagcgcccttgtcctgaagaacgaagaggcaaaagagtcccttcac
agagccaacactgaaatcgcagagctgggtatccaagtgtgtaccctgaccaggcagaac
gaagaggcaaagttgttctgtgaagaactctcaaccaaactgcagaagctgcaagggcag
aagaagtgctcgcagaccctcagcgactctttggagaccctgaagaaagacaactctcaa
ctccaagagaaggtgaaagaagcagagggtctcacaatcgccatgaaagaactccagaag
agacttgaggggtcgcaggaagacaccaggaacttgcggaaaagcaaccagagagagctc
agtgctcttcggcttcagctgagtgaggcaaccacgacccaccaaaaccagatgaaggtt
ttgaacgaggaacttctgggcacaaggtctcaggtggaaaaagagaaggaaaaagtgtca
gccctggagagcagactggcagaacttgaggccactaacaccagccacagtgagacactc
gatgagacaaaggcctgcattgctaaatctgaggtgctgcttcagcagaaagaggaacag
ctccagcaaacacagagcgatttggccatggctcaggaggaacttgcgcttaaacagaaa
tcctgtcaggacctgagcgagaacctgcgcaggatggtcttggaaaaggagtcgagtgat
ctcaagacgtctgcagagatagacgatctttatcgcacaaagagaaacctggaggaaaga
cttatcgagcttattcgggagaaagatgttctgtggcagaaatcagacgctttggagttt
gaacagaggctgagagctgaggagcactcgggccgagagcttccttattgcgccgattgt
cgcacccagttcagctggtggatccacagatacacctgcaagctgtgcggtcggccgttt
tgctattcctgctgcagtaacacagtgagcagccagcagggcggcgctagagagcgttgc
tgcaaagactgttacacacgacacgccgaagcagaggaacttggaagtccgtctcggggg
tcatacagccccctgtgttcgacccccaccagggcctctatgcccagtgtcacagtggca
ccgcagtctttcaggccagacgacgcagcgttcgacatcatcacagacgaggaggtgaac
tgcgtatacgagggcgactcgctgctctacaccactgctctgtctccaggaagcgggcag
catgggatccacgagatcagcagcagtacgagcggcggtgacctcacaccggacgagtcg
gaggagctgccgagctcggtgcaggacgcagagatctgcctgctcaagtctggagaagtc
acgcagacggtgccggtgggcctggaggagatctccaactcacgtcaggagttcagcgaa
ctcttcatcaagtcgagctgctacagtgtcattctcatcaccgtggttaccgctggaccc
accatcagctgggtgttttcttcttcaccaaagagcatctcgttcagcgtggtgtacaga
gagagcacagatattccactggagcaggccaaggtcctgatccccttaaccaggtgtaac
tcccacaaggagacgatccagggccaggtgaaagcccgcaaccccggacagtactcgctt
atcttcgacaactcgttctccaggttcatctcgaaaaaggtgcagtacaaactgagcgta
gagcagacggtcgtctacgatggcagcgagtga
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