Silurus meridionalis (southern catfish): 124403316
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Entry
124403316 CDS
T08004
Symbol
dsela
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124403316 (dsela)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
124403316 (dsela)
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Motif
Pfam:
Sulfotransfer_3
DUF4962
Sulfotransfer_1
Motif
Other DBs
NCBI-GeneID:
124403316
NCBI-ProteinID:
XP_046732949
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Position
20:complement(17710859..17715565)
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AA seq
1207 aa
AA seq
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MAVCVVKPALLLCLVNLGFSFSGIFDPSGKYGTASEHDERADFHTDTNATTERGFHMASN
VHPNLYFDLAEVRRLKKKAAGTHAQVFKVIRNAVTTMLESPTLYLPPTNHEEFAKKWNEI
YGNNLPPLALYCLLQPEDGAAFQFLIKYMDRMAEYPDWMVTSAPHDEVPISHSLTGFATA
YDFIYTYLDNQRKVLYLKKIRSVTAELYELSKHRGWGRQFLQNHQTTNILAMLTGAIVTG
VHKDREAMMWKQVAVNYMEKTMFLLNHIVDGSLDEGVAYGSYTAKSITQYVFLAVRHFEI
DNKHNNWLRAHFMFYYATVLPGFQRTVGIADSNYNWFYGPESQLVFLDAFVLRNGSGNWL
AQQIRKCRPKDGPMTPSVAQRWATLHTEFIWFDAELTPQPPPDFGKADMHVFSNWGVVTY
GAGLPSGQDNTFVSFKSGKLGGRAVYDIVHAKPYSWVDGWTNFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKYSYLNNVLVFAPSPTSQCNAPWEGQLGECSKWLKWGEKEVGDSAGEV
IAASSHQDTMFVSGEAVSAYSSAMKLVSVYRALVLLNSQTLLVLDHVEKHEKSPLTSVSA
FFHNLDIDLRYVPHRSLNKYSGALMDVWDAHYEMFWFDSQGASPVGRIQEVEQVAEFKKR
WTQFINVTFSMDGVVSRVAYLMHGPFVKVSDCRFVDNSKNGVKLSLTLNDTETTVSIATN
YKDIGARLTYLGFAGFAKAENKHRIINFGQGVQVLPSQEKKDSMFNFGFMINVIAVWILC
FAIAVLTIKRKFNVSSRKLIRCTVVSVLVFWVFELLVTSHRCQEVLCGIMWRDLRASEEA
VTRSTFPLDQSPDPLPFIIVTSLPGSGAEILQPLFDNSSDFVYLSVPSTYLRIPETSFAP
DSFADACEWSRADAQNGKFRAIQGWFHSMLHGIRLHLQNIQLYKSSIEAVNKGIKKRRKL
LMEVSEIRDRRSAAREVEYIKELRQHLTDFPNACPVLNLRSGSWSLKLPFLQEVIGHSLR
SVQVVRDPRAWIYLMLYNSKPSLYTSKNIRKHLLNILNQHSDRVGQACTRFDAAFQPLRE
ILAQPDANPVLLLAHLWLAHTSASLRASADLPSYTYLQVKFEDIVNFPEDTAEKIHRFLG
VPVAPAAVNQLAFATSTNLYHIVYEGDVSPAKINMWKENMAPDQIRLIEHVCGTVMDVLE
YKRYVSV
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatgtgtagtgaagcctgcgctcctgctgtgtctggtgaacttgggattttcc
ttctctgggatatttgacccgtcaggcaaatacggaacggccagcgagcatgacgagcga
gccgatttccatacagacaccaacgccacgacagagcgaggatttcacatggcgtcgaac
gtccaccccaacctttatttcgacttggcggaagtgcggcggctgaaaaagaaagccgcc
gggacgcacgcacaggtgtttaaagttatacggaacgcagtaacgaccatgctcgaaagc
ccgacgctttacctaccacccacgaaccatgaggaattcgcaaagaaatggaacgagatt
tatggcaacaaccttccaccgctggcgctgtactgcctactccagcctgaagatggcgcc
gcgttccagtttttaattaaatacatggaccgtatggctgaatatccagattggatggtg
actagcgcaccacacgatgaagttcccatatcccattccctcactggcttcgctacagct
tacgatttcatttatacttatctggacaatcagagaaaggttctatacctcaagaagata
cgttccgttacagcggaactttacgaactgtccaagcatagaggctggggtcggcagttt
ttacaaaaccaccagactacgaacattctagccatgctcacgggagctatcgtaaccggt
gtacataaagatcgtgaagccatgatgtggaagcaggtcgctgtaaactacatggaaaag
accatgtttctcctgaaccacattgtagacggttcgctggacgaaggcgtcgcgtatggg
agctacacggccaaatcgatcacgcagtatgttttcttggcggtgcggcatttcgaaatc
gacaacaagcataacaactggctgagagctcacttcatgttctactacgccaccgtgctc
cctggttttcaaagaaccgtgggcattgcagattccaactacaactggttctatgggccg
gagagtcagctggtgttcctggatgcgtttgttctgaggaacggctcaggtaactggctg
gcgcagcagatcagaaagtgtcggcccaaggatgggcccatgactccatccgtggcgcag
cgctgggctactttacacaccgagttcatctggtttgacgcagagctcactcctcagccg
ccacctgattttgggaaagcagacatgcatgttttttcaaactggggggtggtgacatac
ggcgcggggttgccgtcggggcaggacaacacttttgtgtcttttaaatcggggaagtta
ggtggacgagcggtgtacgacatcgtccacgctaagccttattcctgggtcgacggctgg
actaacttcaacccgggtcatgagcacccggatcaaaactccttcacttttgcaccaaac
ggacaagtgtttgtctctgaagcgttgtacggtccaaaatacagctatctaaacaacgtc
ttggtgtttgcaccttccccaactagccagtgcaatgcaccatgggaggggcagctaggg
gaatgttccaaatggttaaaatggggcgaaaaggaagtaggagacagcgcaggtgaggtc
atcgcggcgtcctcgcaccaggacaccatgttcgttagcggcgaagcggtgtccgcttac
tcgtccgctatgaagctcgttagtgtttatcgagccctggttctgctcaactcgcaaacc
ttgttagtgttagatcacgtcgaaaagcatgaaaaatcccccctaacctcagtaagtgcc
tttttccacaatcttgacattgacctgagatacgtcccgcacaggtctttgaataaatac
agcggcgcgctaatggacgtatgggacgctcattacgagatgttttggtttgacagtcag
ggagccagtcccgtcggtaggatacaagaagtagaacaggtcgcggagttcaaaaagagg
tggacgcagttcataaacgttactttttccatggacggtgtagtcagcagggtggcctac
ctgatgcacggcccgtttgtcaaagtatcagactgcaggtttgttgacaacagcaaaaat
ggagttaaactgtcacttaccctgaatgacacagagaccaccgtgtccatagcaacaaac
tacaaagacattggtgccagactcacctacttaggcttcgcaggattcgcaaaagcagag
aataaacacaggattatcaattttggtcagggagttcaggttctacccagtcaagagaaa
aaagactccatgtttaactttggtttcatgatcaatgtcatcgcagtgtggattctatgt
tttgccatcgcggttttgaccataaagagaaagtttaacgtctcctcccggaaacttatc
cgctgcacggtcgtttcagtgctagttttctgggtgtttgaactcttagtgacgtctcat
cgttgtcaggaggtgctgtgcggcatcatgtggcgggatctccgtgcctccgaggaagcc
gtcactcgatccacgttccctctcgatcagtccccagaccctcttcctttcattatcgtc
acctcgcttcccggctctggagctgagatccttcaacccctttttgacaacagttccgac
tttgtgtatcttagtgttccctccacctacctccgtatccctgagaccagttttgctccg
gactcgtttgcagacgcttgcgagtggtccagagcggatgcccagaacggaaagtttcga
gccatccaaggatggttccattcgatgttacatggtatcagactgcacctgcagaacatt
cagctctacaagagcagtatcgaagcagtgaataagggaataaagaagagacggaagctg
ctgatggaggtgagcgagatcagagacaggaggtcagcagcgagagaggtggagtatatc
aaggagttgaggcagcacttgacggacttcccaaatgcctgccctgtgctgaaccttcgc
agcgggagctggtccttaaaactcccattccttcaagaagtcatcggacactcgttgaga
tcggttcaagtagtgcgtgacccccgggcgtggatctatctcatgctctacaacagcaag
ccgagcctttacaccagcaaaaacattcgaaaacacttgctgaacattttgaaccagcat
agcgacagggtaggacaggcgtgcacgaggttcgacgccgcatttcagccgttacgagag
atcctcgctcagccagacgctaaccctgtcctcctgctggctcatctctggctcgctcac
acgtctgccagtctccgagcgagcgccgacttgccctcgtacacgtacctacaggtcaaa
ttcgaggacatcgtgaactttcctgaagataccgcagaaaagatacacaggtttctcggc
gtccctgttgctccggccgccgtaaaccagctcgcgttcgccacgtccacgaacctgtat
cacatagtctacgaaggagatgtatcacctgccaaaattaacatgtggaaagaaaacatg
gctcctgaccagattagacttatagaacatgtgtgtgggaccgtcatggacgtcctcgag
tacaaaagatacgtgtctgtatga
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