KEGG   Silurus meridionalis (southern catfish): 124403633
Entry
124403633         CDS       T08004                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3 isoform X1
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo00510  N-Glycan biosynthesis
smeo00513  Various types of N-glycan biosynthesis
smeo00514  Other types of O-glycan biosynthesis
smeo00515  Mannose type O-glycan biosynthesis
smeo00533  Glycosaminoglycan biosynthesis - keratan sulfate
smeo00601  Glycosphingolipid biosynthesis - lacto and neolacto series
smeo01100  Metabolic pathways
Module
smeo_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
smeo_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    124403633 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    124403633 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    124403633 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    124403633 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    124403633 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    124403633 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:smeo01003]
    124403633 (si:dkey-199f5.8)
Enzymes [BR:smeo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     124403633 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     124403633 (si:dkey-199f5.8)
Glycosyltransferases [BR:smeo01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   124403633 (si:dkey-199f5.8)
  Glycolipid
   124403633 (si:dkey-199f5.8)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 124403633
NCBI-ProteinID: XP_046733282
LinkDB
Position
21:complement(18334197..18341426)
AA seq 325 aa
MPTLTSKWRYLFMLLGVQLIVMALLSREAYQKRVTYFFRIFRKLDVLSGSAGPGSGHGSN
HTGADVYANLSHLAQAFNKEDLHYCPKTSPLLSGPIHVSFPSGLTLAQVERKNPLVVRGG
RYRPPDCEARHRTAIIIPHRNREQHLKFFLYYIHPFLQRQQLSYGIYVIHQAGDYTFNRA
KLMNIGFREAMREEDWDCLFFHDVDLIPEDDRNMYTCDRNPKHAAIAMDKFGYKLPYKAY
FGGVSALSPLHYLKMNGFPNNYWGWGGEDDDIGIRVSLAGMSISRPSLKIGRYKMIKHKL
DEGNEVNPKRFSLLAKTQQAWRADG
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcccaccctgacctccaagtggcgctatctgttcatgctgctcggcgtgcagctcatc
gtcatggccctcctgtccagggaggcgtaccagaagagggtgacgtattttttccggatc
ttccgcaaactggacgtgctaagcggctcggccgggccggggtcgggtcacgggagcaac
cacaccggtgctgacgtctacgcaaacctgtcccacctggcacaagcgtttaacaaagag
gacctgcactactgccctaaaacatcaccactacttagtggaccaatccatgtcagcttc
ccatcaggactcacactcgctcaggtggagaggaagaatccactggtggtgcgcgggggg
cgctacagaccgccggactgtgaggctcgacatcgcaccgctataatcattcctcacagg
aacagagaacaacatctgaagttcttcctctactatatccatcccttcctacagagacaa
cagctgagttacggcatctacgtcatccatcaggctggtgactacacgtttaaccgggca
aagcttatgaacatcgggttccgggaggctatgagggaagaggactgggactgtcttttc
ttccacgacgtggacctgatccccgaggacgaccgcaacatgtacacgtgtgaccgcaac
cccaaacacgccgccatcgccatggacaagttcggttacaaactgccctataaggcgtat
tttggaggtgtttccgcgctcagtcctctacactatctgaagatgaacggttttcccaac
aactactggggctgggggggtgaggacgacgacatcggcatccgcgtgtctctggccggg
atgtccatcagtcgcccgtctctgaagatcggccgctacaagatgatcaagcacaaactg
gatgaaggcaacgaggtcaaccctaaaaggttcagtctgttggcgaagactcagcaggcg
tggagggcagacggatga

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