Shewanella mesophila: K0I73_00145
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Entry
K0I73_00145 CDS
T09171
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
smes
Shewanella mesophila
Pathway
smes01501
beta-Lactam resistance
smes01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I73_00145
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I73_00145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smes02000
]
K0I73_00145
01504 Antimicrobial resistance genes [BR:
smes01504
]
K0I73_00145
Transporters [BR:
smes02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I73_00145
Antimicrobial resistance genes [BR:
smes01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I73_00145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYJ86234
LinkDB
All DBs
Position
31896..35048
Genome browser
AA seq
1050 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIMNLPVSQYPSIAPPTVVISASYPGASAKTMEDT
VTQVIEQRMTGIDNLRYISATSDSFGNAQLTLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVKVAKSSSGFLMVLGFVSQDGSLEKNDISDYVGSNIQDPMSRVAGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSQDIMASIREQNAQVSAGQLGGAPSIQGQELNATVSAQSRL
QTAEEFKKIIIKSDTSGAKVFLEDVARVELGAESYAVESYYNGKPAAGLAIKLATGANAL
ATAELVREKVDEMKPFFPQGLDVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMAL
SVMVAIILTPALCATMLKPIAKGESHTKAGFFGWFNRKFDEMTSRYESGVASMIKRTGRV
MLIYLALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQETTKKVMEKVTDFYLNQ
EGDNVKSVFSVSGFSFAGSGQNMGLAFVGLKDWSERQNPGQDVKSISGRAMGAFMQMKEA
FVFAFVPPAVIELGTANGFDLYLQDRNGQGHEKLLEARNMLLGMAAQNPNLVGVRPNGQE
DAPMYQIHVDHAKLRALGIDIDSVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQ
PEDLDSWYVRNAQGEMVPFSAFATGSWEFGSPRLERFNGLPAMNIQGGTAPGYSTGAAMA
DIEAMVAKLPPGFGVEWNGLSYEERLSGNQAPALYALSIMVVFLVLAALYESWSVPFAVI
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTGVLGGMMSSTFLGIFFIP
IFFVIVERIFSKRERNGGSDVAKVDSPIKD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttctttatcgatcgccctatctttgcctgggtgatcgcaattatcgttatg
ttggctggggtgctttctataatgaacctccctgtgtcgcagtatccaagtattgcgccg
ccaaccgttgttattagtgctagttatcctggcgcttcagcaaagaccatggaagataca
gttactcaggtgattgagcaacgtatgacggggattgataatcttcgttatatttcagcc
accagtgatagttttggtaatgcgcaacttactttgacttttaatgctgaggctgatcct
gatattgctcaggttcaagtgcaaaacaagctccaacttgctatgccgctattacctcaa
gaggttcaagcacaaggggttaaagtcgctaaatccagctctggtttcttgatggtatta
gggttcgtatctcaagatggttcgctggaaaagaatgatatttcggattatgtgggatca
aatattcaagatcctatgagtcgtgttgcaggagtgggcgagatccagctgtttggtgcg
caatatgcgatgcgtatttggctcgatccgctgaaattaactcaatataacctcaccagc
caagacattatggcatcgattcgtgagcaaaatgctcaggtttctgctggtcaattgggg
ggagcgccatcaattcaggggcaggagttaaatgcaaccgtctctgcacagagtcgtctg
caaacagctgaagagtttaagaagatcatcattaagtctgatacttctggtgctaaggtt
ttccttgaagatgtcgctcgtgttgaacttggtgccgaaagttatgcggtagaatcttat
tataacggtaagccggcagcgggtttggcaattaagctcgccacgggcgctaatgcattg
gctacagcagagctcgtgcgcgaaaaggttgatgagatgaagcccttcttccctcaaggg
ttagatgtggtttatccctatgatacaactccatttgttgagaagtcgattgagggcgtt
gttcacacgttactagaagctgtggtattggtgtttgttatcatgtacctcttcttgcag
aacttccgtgcaaccctaattccaacgattgccgttcctgttgtgttacttggtactttt
gccattttgtcggcggctggtttctctatcaatacactcacaatgtttgcgatggtgcta
gctattggcttgctggtggacgatgcgattgtggtggtcgaaaacgttgagcgtgtgatg
caagaagagggcttaagcccactcgaagcgacacgtaaatcgatggatcagattactgga
gctcttgtcggtattggtttgactctgtctgcggtattcgtacccatggcctttatgtct
ggctctacaggggttatttatcgtcagttctcggtaaccattgtgtctgctatggcactg
tctgtcatggtggcgattatcttaacgccagcgctttgtgcgaccatgttaaagcctatt
gcaaaaggtgaaagccacactaaggccgggttctttggttggttcaaccgtaaattcgat
gagatgacatctcgttatgaatctggggttgcatcgatgattaagcgtactggccgagtt
atgttgatttatctagcattggtggttgctgttggttggatcttcatgcgtatgccaacg
gctttcttacctgatgaagaccaaggtattttgtttactcaggctattttaccaacaaac
tcaacccaagaaaccactaagaaagtgatggagaaagtcacagacttttatctcaatcaa
gagggagacaatgttaagtcggtcttcagtgtttcaggctttagtttcgctggtagcggt
caaaacatgggtcttgcgtttgtcggattaaaggattggtctgagcgacaaaatcctggt
caagatgtaaagtctatttctggacgcgctatgggggccttcatgcagatgaaagaagcc
tttgtatttgcgtttgtaccgccagcggtaatcgagctgggaacagccaatggttttgat
ctctatctgcaagatagaaatggtcaaggtcacgaaaagctgctcgaagcgcgtaatatg
ctgttaggtatggctgcacagaatcctaatttggttggtgttcgtcctaatggtcaagaa
gatgcgcccatgtaccaaatccatgttgatcatgccaagcttagggcgttggggatcgat
atcgattcggtaaacagtgtcctcggaactgcttggggtggtagttatgtgaatgacttc
attgatcgtggtcgagttaagaaagtatacgttcagggcgatgcgcaatatcgtatgcaa
cctgaagatcttgactcatggtatgtgagaaatgctcaaggtgagatggttcctttctcg
gcatttgcaactggcagttgggagtttggctctccacgtctcgaacgttttaacggtctg
ccagcgatgaatatccaaggcggaacagcaccaggttacagtacaggtgcggcgatggca
gatatcgaggctatggtggctaagttgccccctgggtttggtgttgagtggaatggcctt
tcctatgaagagcgtttatcgggcaatcaagcacctgcgttatacgcgttgtcgattatg
gtcgtgttcttggtacttgctgcactctatgagagctggtcggtaccatttgcggtgatc
ttagtggttcctctagggatcattggtgcactactggcgatgaatggccgcggcttgccc
aacgatgtgtttttccaggtgggtttgttgaccacggttggcttagcgaccaagaacgcg
attttgattgttgaatttgcgaaagagttctacgagaaaggtgcaggtctagtcgaagca
accttgcacgcggttcgtgtacgtttgcgcccaatcttaatgacctcactagcctttggc
ctaggtgttgtgccgttagccatcagcagtggtgttggctctggtagtcagaatgctatc
ggtactggtgtattgggcggcatgatgagctcgacgttcttagggatcttctttattcct
atcttcttcgtgatcgtcgagcgaatcttcagtaaacgagagcgcaatggcggtagtgat
gttgccaaagtggactcaccaataaaagattaa
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