Shewanella mesophila: K0I73_15095
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Entry
K0I73_15095 CDS
T09171
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smes03009
]
K0I73_15095 (rlmC)
Enzymes [BR:
smes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
K0I73_15095 (rlmC)
Ribosome biogenesis [BR:
smes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I73_15095 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Methyltransf_12
TRM5-TYW2_MTfase
UPF0020
Methyltransf_11
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QYJ85512
LinkDB
All DBs
Position
complement(3399131..3400306)
Genome browser
AA seq
391 aa
AA seq
DB search
MPPFLSSSASQTFVKCAYFDAKQCLSCRNIETPLPAQLAAKSVVLSELLTGLTVEQWLPP
ISGPDSGFRNKAKMVVLGAAHQPILGLVSPSGEPVSLCDCSLYPLEMQQLLHRLERFVRQ
AGIPPYRVYKAKGELKFILLTRSQVRGEYMLRFVLRTTGAIARIERELPILLADYPQIKV
VSVNLQPVHMAILEGDEEIFLSEATRLEECFNDVPLYIRPKSFFQTHPEVAAKLYQTARE
WTAQLKPDAIWDLFCGVGGFGLHCASPSISLTGIEIEPEAIACAKMSAEAMGLNNVQFSA
LDSTEFASGSDAQNKPDLIIVNPPRRGIGEALCHSLSAFAPKAILYSSCNPKTLAKDLKQ
ITGYRITKVQLFDMFPHTDHFEVLVMLKREL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccttttttatcaagttcagcgagtcaaactttcgtgaagtgtgcttatttcgat
gccaagcaatgcctatcttgtcgcaatattgagacgccgttaccggcacagttagcggca
aaatcagttgtgctaagtgaactgcttacggggttaacggttgaacaatggttgccaccc
atctcaggccccgatagtggatttcgaaataaggctaaaatggtggtacttggcgctgcg
catcaacccattttaggcttggtgagcccaagtggtgagcctgttagcttgtgcgactgc
tcgctttatccattagagatgcagcaactgttacatcgactcgaacgatttgtcaggcag
gcggggataccgccatatcgcgtctataaagctaagggcgaacttaagtttatcttgctg
actcgcagtcaagttcgcggcgaatatatgctcaggtttgtgttgcgaacaacaggtgca
atcgcacgcattgagcgggaactaccgatattactggccgactatcctcaaatcaaagtc
gtttccgtcaatctgcaacctgtacatatggcgattctggaaggggatgaagagatattt
cttagcgaagcaacccgtttagaggagtgcttcaatgatgtgcctttgtatattcgtccc
aagagcttttttcagacccatccagaggtcgctgccaagctgtatcaaactgcccgtgaa
tggactgcgcaattgaagccagatgcaatttgggatctgttttgtggtgtgggtggtttt
ggcttgcactgcgcttcgccgtcaatctcactcacaggtattgaaattgaacctgaagcg
atcgcttgcgctaagatgtctgcagaggcgatgggacttaacaatgtgcagttttccgcc
ctcgattccaccgagtttgctagtggaagtgacgctcagaacaaacccgatctgattatc
gttaaccctcctaggcgcggtattggtgaggcgctttgccattctctcagtgcatttgca
cctaaggctattttgtattctagttgtaaccctaagaccttggctaaagatctcaagcag
atcacgggttacaggataactaaggtacaactctttgatatgtttcctcatacggatcac
ttcgaagtcctcgtcatgttgaaacgtgaactctag
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