Sinorhizobium meliloti Rm41: BN406_03298
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Entry
BN406_03298 CDS
T02332
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN406_03298 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smi03400
]
BN406_03298 (nth)
Enzymes [BR:
smi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN406_03298 (nth)
DNA repair and recombination proteins [BR:
smi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN406_03298 (nth)
Prokaryotic type
BN406_03298 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCM69343
LinkDB
All DBs
Position
3471645..3472436
Genome browser
AA seq
263 aa
AA seq
DB search
MKNVKLKSPPQEPKPAKATTRRTGGRTGPRSAYRTAEVEEIFRRFSVQRPEPKGELEHVN
PFTLVVAVALSAQATDAGVNKATRQLFAVADTPEKMLALGEERVRDYIKTIGLYRNKAKN
VIALSEKLIADFGGEVPRTREELVTLPGVGRKTANVVLSMAFGQPTMAVDTHIFRIANRI
RLAPGKTPDEVEAHLLRVIPEHYLFHAHHWLILHGRYVCKARRPECERCVIADLCKSPEK
TCDIPAPLVELPPQAISVAARSR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtgaagctcaaatcgccaccacaagagccaaagcctgcgaaagcgacaacg
cgccgcacgggaggccgcacggggccacgcagtgcctaccgcacggcggaagtcgaggaa
atcttccgccgcttttcggtgcagcgtccggagccgaagggcgagctcgagcacgtcaat
ccgttcacgctcgtcgtggcggtggccctctcggcgcaggcgacggatgccggcgtcaac
aaggcgacccggcagctcttcgctgtcgccgatacgccggagaagatgctcgcgctcggc
gaggaacgggtccgcgactatatcaagacgatcggcctctaccgcaacaaggcgaaaaac
gtgatcgccctctccgagaagctgatcgccgacttcggcggcgaggtgccgcgcacgcgc
gaggagctcgtgacgctgcccggcgtcgggcgaaagaccgcgaacgtcgtgctctcgatg
gccttcggccagccgacaatggccgtcgacacccatatcttccgcatcgccaaccgtatc
cgtcttgcgccgggcaagacgccggacgaggtggaggcgcacctcctgcgggtgatcccc
gagcactatctgttccatgcccatcactggctgatcctgcacggccgctatgtctgcaag
gcgcgccggccggaatgcgagcgctgcgtgatagcggacctctgcaaatcgccggaaaag
acctgcgatatcccggccccgctcgtggaattgccgccgcaggcgatctccgtcgccgcc
agatcacgatga
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