Salvia miltiorrhiza (redroot sage): 130987662
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Entry
130987662 CDS
T09291
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03420
Nucleotide excision repair
smil04120
Ubiquitin mediated proteolysis
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130987662
04120 Ubiquitin mediated proteolysis
130987662
09124 Replication and repair
03420 Nucleotide excision repair
130987662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130987662
03400 DNA repair and recombination proteins [BR:
smil03400
]
130987662
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
130987662
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130987662
Multi subunit type E3
SCF complex
Ring finger protein
130987662
Cul2 complex
130987662
Cul3 complex
130987662
Cul4 complex
130987662
Cul7 complex
130987662
Cul8 complex
130987662
Cul9 complex
130987662
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130987662
TCR (transcription coupled repair) factors
Cul4-CSA complex
130987662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
130987662
NCBI-ProteinID:
XP_057767255
LinkDB
All DBs
Position
1:47160958..47163601
Genome browser
AA seq
125 aa
AA seq
DB search
MATLDTDVNMVPAGEGSSGAGPSNTTPQPPQSSKKSKKFEIKKWNAVSLWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctcgacaccgacgtcaacatggttccggctggagagggctcatccggcgcc
ggcccttccaacaccacgccacagccgccgcagtcctccaaaaaatccaagaaatttgag
attaaaaagtggaacgccgtctcgctctgggcttgggatatcgtggtcgataattgtgct
atttgcaggaaccatataatggatctatgcatcgagtgccaagctaatcaagctagtgcg
acgagcgaggaatgcacggttgcttggggggtttgcaaccatgctttccacttccattgc
atcagcaggtggcttaagactcgccaagtttgccccctcgataacagtgagtgggagttt
cagaagtatggccactag
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