Salvia miltiorrhiza (redroot sage): 130997515
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Entry
130997515 CDS
T09291
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130997515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130997515
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130997515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_30
AAA_15
AAA_23
SMC_N
AAA
Arf
Zeta_toxin
AAA_19
ORC-CDC6-like
ATP-synt_ab
Peptidase_M60
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
130997515
NCBI-ProteinID:
XP_057778833
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All DBs
Position
8:29101326..29104559
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AA seq
318 aa
AA seq
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MVVEVEKSHPTVQVTKLKFTYPGIDGHPPPGAKPLIDDFNLSLFAGDRCLLVGSNGAGKT
TILKIIGGKHMVEQETVRVLGRSAFHDTALTASGDLSYLGGEWRREVAFAGYEVPIQMDV
SADKMIFGVAGVDPKRRDELIKVLGIDLSWRMHKVSDGQRRRVQICMGLLKTFKVLLLDE
ITVDLDVLARADLLKFLKKECEERGATIIYATHIFDGLEDWPSHIVYVAHGKLQLTMPMN
EIKELSNLSLMRTVERWLRKERDEERLRRKERKAKGLPEHEKRVDGSRVINNGWAAGRLN
STVAGEENFVLSSNRVLR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggaggtggaaaaatctcacccgacagtgcaggtcaccaagctcaaattcacc
tatccgggaatcgacggtcatcctccgcccggcgcaaagcctctcattgatgatttcaat
ctctctctcttcgccggcgaccgctgccttcttgtcggctccaatggcgcagggaaaaca
actatcttgaaaattattggagggaagcacatggtggagcaggaaactgttagggttttg
ggaagatcagcgtttcacgacactgcattgactgcgtccggcgatctttcttatcttggc
ggcgagtggagaagagaagttgcttttgctggttatgaggttccaattcaaatggatgtg
tctgctgataaaatgatttttggggtagcaggcgtcgatcccaaaagacgagatgaacta
ataaaggttttaggaattgacttgtcctggagaatgcataaagtatccgatggtcaaaga
aggagagttcaaatatgcatgggtcttctaaagacattcaaggtcctcctgctcgatgag
atcactgttgacttagatgtcttagcccgggctgacctcctaaagtttctgaaaaaggaa
tgtgaagaacgcggagcaacaatcatttacgctacacatatcttcgatggtcttgaggat
tggccatctcacattgtgtatgtggctcacgggaagttgcaactcacgatgccaatgaat
gaaatcaaagagcttagcaatctgtccttgatgagaactgtggagcgttggctgaggaaa
gagagagacgaggagcgactgagaagaaaagagaggaaggcaaaggggctgccggaacat
gagaaaagagtagacggcagccgtgtgataaataatgggtgggctgctgggaggctaaac
tcaactgttgctggagaagagaattttgttttgagctcaaatagggtcctcagataa
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