Salvia miltiorrhiza (redroot sage): 131000351
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Entry
131000351 CDS
T09291
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131000351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
131000351
Transcription factors [BR:
smil03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
131000351
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
131000351
NCBI-ProteinID:
XP_057782208
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Position
1:60470346..60474440
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AA seq
533 aa
AA seq
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MNHCVPEFHEMEDDDSIPTPSTFSRPKRTATGEEEIMELLWQNGQVVVQSQNQKPPKRTD
SCGGSGEVVIPPEREIRSTAEEHQHLFMQEDEMASWLQYPLDDSFDRDFYADLLYSAPPP
PPLITATANAQPRAAAEIRPPPIQTPVARPDNPPRVHNFVHFSRLPIRPRTAPRESSTVV
ESNETPTDARESRVSHKVTDSRPPVHADTSTVRTRDTSGAAGTCDLTVTSSPDGSPASFS
GETHQPQQKPAAAADDRKRKVREADDNECQSEDIEFEASEGKKQGRGSSSTKRSRAAEVH
NLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPM
MYPAGMQQYMPAMGLGMGMGMGMDMGMSRPVVHYPPMMAGSAMPNPAAAAAQMGPRFALP
PFHMQPVPIPDPSRSQPTNHTDPVPNSTIPQNHNHPRFPSFSDSYQQYLGFHPTQLPIPQ
NQGVVQHDDNKPSTSKDIGNPHNQQTGKETMLLLWHFTFIIYFEFVMKVKRFV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgttcccgaatttcatgaaatggaggacgacgattccattcccacgcct
tccactttctctagacccaaaaggactgcgacaggtgaggaggagatcatggagctgcta
tggcagaacggtcaagtagtggtgcagagccagaaccagaaaccgcccaagaggaccgac
tcctgcggcggcagcggagaggtcgtgattccgccggagagggagatccgatccaccgcc
gaggagcaccagcatttgtttatgcaggaggatgagatggcgtcttggcttcagtatcca
ctcgatgattccttcgatcgcgatttctacgccgatctcctctactccgctccgccgccg
ccgccactcatcaccgccaccgccaacgcgcagcctagggcggcagcggagatccgcccc
ccgcctatccagacgccggttgccagacctgacaatccgccgcgggtgcacaatttcgtg
catttctcgaggctcccgatcaggccgaggacggcgccacgagaatcgtcgacggtggtg
gagtcaaacgagactccgacggacgcacgggagtctagggtttctcacaaggtgaccgac
agcaggccgccggtgcacgcggatacctccacggtgagaactagagacacgtcgggtgcc
gcgggtacttgtgacctcaccgtcacctcgtcgcccgacggctcccccgccagcttcagc
ggagagacgcatcagccgcagcagaagccggcggctgccgcggatgatcggaagcggaaa
gtaagagaagccgacgataatgaatgtcagagtgaggatatcgagtttgaagcttccgaa
ggtaaaaaacaaggccgtggttcatcatcgacaaagagatcacgtgctgcagaagttcac
aacctgtcggagaggaggcgacgggacaggataaatgagaaaatgagggcactacaagag
ctcatcccacgttgcaataagtcagacaaagcttcaatgctggatgaggctatcgaatac
ttgaaatcacttcaattacaagtgcagatgatgtcgatgggttgtgggatggttcccatg
atgtacccggcgggcatgcagcagtacatgcctgcaatggggttgggcatggggatgggg
atggggatggacatgggaatgagtcgtccggtggtccattatccacctatgatggccggc
tcagccatgccgaatcctgcagctgcggcagctcaaatgggtcctagatttgccctgcca
ccatttcatatgcaaccagttcctatacctgatccttcaagatcacaacctactaaccac
acagatcccgtgccaaactccactattcctcagaatcacaaccacccaaggtttccaagc
ttttcggattcgtatcaacagtatcttggtttccatcccacacaactaccaataccacag
aatcaaggtgtggtgcagcatgacgacaacaaaccaagcaccagcaaagacatcggcaac
cctcataaccagcaaactggtaaagaaaccatgctacttttatggcatttcacatttata
atttattttgaatttgtgatgaaggtgaagagatttgtgtga
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