Salvia miltiorrhiza (redroot sage): 131009362
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Entry
131009362 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
131009362
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
131009362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
DEAD
zf-RING_5
ResIII
zf-RING_2
Prok-RING_4
zf-RING_UBOX
zf-rbx1
Microp_apicomplexa_17
zf-RING_Vps41
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
131009362
NCBI-ProteinID:
XP_057792639
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Position
2:complement(74461454..74468005)
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AA seq
899 aa
AA seq
DB search
MKLRSHGDGASSSKGKAKLKYGDSSDAEDYGAASSDSDFNVLSGDEGEDLLDVLAYSAEV
FNLNYVSDEDGVPKRRKKNSYGKRGSQSSKKAEEEESERGTGAHIETVIGIDPGKIEFAG
GIAEKSCRKKKGRKKKDRPILMWEVLEQENDRWIEENLQIDMDLINQNEIVMETVEPSDD
LIIPLLRYQKEWLAWALKQEESTARGGILADEMGMGKTLQAIALVLFKRSFSSGIPDPAL
PSSSISSSRELPPIKGTLVICPLVAVMQWVREIDRFTSKGSTKVLVYHGANRAKYLYQLS
DYDFVITTYAIVEAEFRKYVLPPKDKCQYCGKLFYEHKLKIHLKYMCGPGAVRTIKQAKQ
QRKELKCKKTPDLEVHTSEIKKGNKNGNGRKEMENDDSIESSDVTGLTSSKGKSILHCAA
WERIVLDEAHCIKERRSNTTRAVLALQSKYKWALSGTPLQNRVGELYSLIRFLQIVPFSY
YFCKDCDCRTLDYSSAECPGCEHKNVRHFCWWNRYVSTPIKILAGRGGGRGAMILLKHKI
LKSLVLRRTKKGRAADLALPPRIVTLRRDSLDIVEEDYYTALYNESQAQFNTYVDAGTLM
NNYAHIFDLLTRLRQAVDHPYLVEYSLTAMERKGKTVDTRSDAKCGLCNDTEEDTVVTSC
GHTFCKPCLIDFSASMGQNSCPTCSKPLTVDFTSNKDGKEQRSKTTIKGFRASSILNRIQ
LHDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFSSFLDLIHYSLQKSGVHCVQLDGSM
SMGARDAAIKKFTEDPSCRIFLMSLKAGGVALNLTAASHVFLMDPWWNPAVERQAQDRIH
RIGQYKPIRIVRFIIENTVEERILKLQDKKELVFEGTVGGCSEALAKLTEADLRFLFVT
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgctctcatggcgatggcgcttcttcttccaaagggaaagcgaaattgaag
tacggagacagttctgatgcggaagattatggagcggcgtcatccgattctgattttaat
gtgctgagtggtgatgaaggtgaagatctgcttgatgtacttgcatacagcgcggaggtt
ttcaatttgaattatgttagtgatgaagatggtgtcccgaaaaggaggaaaaagaactcc
tacggaaaaaggggaagtcagagtagtaaaaaagctgaggaagaagagagtgagagaggc
accggtgcacatattgagactgttattggcatcgatccagggaaaattgaatttgctggt
ggcatagctgagaaatcttgtaggaaaaagaagggtaggaagaaaaaagataggcctata
ttaatgtgggaagtattagaacaagaaaatgatagatggattgaagagaatttacaaata
gatatggacttgataaatcagaatgagatagtgatggaaactgttgagccttcagatgac
ttgataataccactactaagataccagaaggagtggttagcttgggctttgaagcaagag
gaatctactgcccgaggtggcatacttgcagacgaaatgggaatgggcaagactctccag
gcaatagcgctcgttctattcaaaagaagtttctcatcaggaattcccgatcctgcttta
ccctcatcttcaatcagttcctcaagggagttaccaccgataaagggtacacttgttata
tgtcccttggtcgctgtgatgcagtgggttagagagattgatcggttcacttccaaggga
agtaccaaggttcttgtgtatcatggtgccaaccgagcaaaatatctttatcagctttca
gattatgattttgttataacaacatatgcaattgttgaggcagaattcagaaaatatgtg
ttgcctcctaaagacaaatgccagtattgtggaaaattgttttatgagcataagttgaaa
attcacttgaaatatatgtgcggtcctggtgctgttcggacgattaagcaggcaaagcag
caaagaaaggaactaaagtgcaagaaaacgccggatcttgaggttcatacaagtgagata
aaaaaagggaataaaaatggcaatggtcgcaaggaaatggaaaatgatgattcaattgag
agttcagatgtgactggcctaacatcttccaagggaaaatctattttgcattgtgcagct
tgggaacgcattgtattggatgaggctcattgtattaaagaaagacgtagcaatacaact
agagctgttcttgctctacaatctaaatataaatgggctttaagtggtactccccttcag
aatcgtgtgggcgagctctactcccttattcgctttctacagatagtacctttctcgtat
tatttctgcaaggattgcgattgccgtactcttgattacagttcagcagaatgcccgggt
tgtgagcataaaaatgttcggcacttctgctggtggaatagatatgtttccacgccaata
aagattctggccggaagggggggcggtagaggtgctatgattttgttaaagcacaaaatc
ttgaaaagcttagtgttaaggcgtacaaaaaagggcagagcagctgatcttgcactacct
cctagaattgttaccttgagaagagattctctcgatattgtggaagaagactattataca
gcactctacaatgaaagtcaagcacagtttaatacatatgtcgatgcaggaacgttgatg
aataactatgcccacatatttgacctactgacacgccttcgtcaggcagttgatcatccc
taccttgtggaatattctcttactgcaatggaaagaaagggcaaaaccgttgatactaga
agtgatgcaaaatgtggtttgtgtaatgacaccgaagaagacactgtggttacatcatgt
gggcataccttctgcaagccctgtttgattgattttagtgctagcatgggacaaaactcg
tgccctacttgttcaaagccacttactgttgatttcacctccaacaaagatgggaaagaa
cagaggtcaaaaacaaccattaaaggattcagagcatcaagtattttgaatagaatccaa
cttcatgattttcagacaagtacaaaaattgatgccttgagggaagaaattcgatttatg
gttgaaagggatggctctgccaaggcaattgtcttcagccagttctcgtctttcctggat
ctcattcactattcccttcaaaagtctggagtgcactgtgtccagttagatgggtccatg
tccatgggagctagagatgctgctatcaaaaaatttactgaggatcctagttgcagaata
tttttaatgagcttaaaagcagggggtgttgctctcaatctcacagcagcgtcacatgtt
ttcttgatggatccgtggtggaatcctgctgtggagcggcaagcgcaagatagaatacat
cgaataggccaatacaaaccaatccggattgtaaggtttattattgaaaacaccgttgag
gaaaggattttaaagttgcaggacaagaaggaattagtattcgagggcacggtgggcggg
tgttcggaggctctggcaaaattaacagaagctgatctgagattcctgtttgtgacctaa
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