Salvia miltiorrhiza (redroot sage): 131014240
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Entry
131014240 CDS
T09291
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131014240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
131014240
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131014240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_29
nSTAND3
NACHT
AAA_22
AAA
SMC_N
AAA_28
AAA_15
AAA_23
AAA_18
AAA_5
DUF963
AAA_16
Zeta_toxin
AAA_24
FtsK_SpoIIIE
AAA_14
AAA_33
SRP54
PduV-EutP
AAA_7
AAA_25
VapE-like_dom
DUF3584
AAA_30
AAA_13
Motif
Other DBs
NCBI-GeneID:
131014240
NCBI-ProteinID:
XP_057798125
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All DBs
Position
3:51781663..51784959
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AA seq
287 aa
AA seq
DB search
MEGEGSHSIQVTGMQFSYDATSPIFFDFNLNVSPGSRCLLVGANGSGKTTLLRILAGKHM
VGDRDVVRVLNCSAFHDTSLVCNGDLAYLGESWSKTVSSAGDLPLQGDFSAEHMIFGVEG
VDPVRRDMLIELLDINLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARM
DLLEFFKEECEKRGATIVYATHIFDGLETWATNLVYVQDGTLKKSEKMAELNELKHNPNL
LSVVESWLRSETKIEKKKPINSPSPLKKSSPFDASPFKSSRHMAYYR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaaggatcccacagcatacaggtcaccggcatgcaattctcctacgacgcc
acttcccctatcttcttcgatttcaatctcaacgtatcgccgggatcgcgctgcctcctc
gtcggcgccaatggatccggtaagacgactctgctgcggatactggcggggaagcatatg
gtgggcgaccgggatgtggtgagagtgctgaattgctccgcatttcacgacaccagtctc
gtttgcaacggtgatttggcctatttgggagaatcttggagcaagactgtcagctctgct
ggggacctaccgcttcaaggcgacttctcagctgaacatatgatatttggagttgaaggt
gttgaccctgttagacgggatatgctgatcgaacttttggatattaatcttcagtggcgg
atgcacaaggtatctgatggccaacgacgtcgggtgcaaatttgcatgggtcttcttcat
ccttacaaggtacttttgctagatgaggtcactgtcgatctagacgttgtggctaggatg
gatttgctggaatttttcaaggaagagtgtgagaagagaggagcaacaattgtttatgca
actcatatttttgatggactcgagacatgggcaaccaatcttgtttatgttcaagatggt
acgttgaagaagtcggagaagatggccgagctcaatgaactgaagcataacccgaatttg
ctctcagttgttgagtcatggctacggtctgaaacaaagattgagaagaagaagccaata
aactctccatcccctcttaaaaaatcttctccatttgatgcttctccttttaagtcttca
agacatatggcatattaccgctga
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