Salvia miltiorrhiza (redroot sage): 131021462
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Entry
131021462 CDS
T09291
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03420
Nucleotide excision repair
smil04120
Ubiquitin mediated proteolysis
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131021462
04120 Ubiquitin mediated proteolysis
131021462
09124 Replication and repair
03420 Nucleotide excision repair
131021462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
131021462
03400 DNA repair and recombination proteins [BR:
smil03400
]
131021462
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
131021462
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
131021462
Multi subunit type E3
SCF complex
Ring finger protein
131021462
Cul2 complex
131021462
Cul3 complex
131021462
Cul4 complex
131021462
Cul7 complex
131021462
Cul8 complex
131021462
Cul9 complex
131021462
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
131021462
TCR (transcription coupled repair) factors
Cul4-CSA complex
131021462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
131021462
NCBI-ProteinID:
XP_057806638
LinkDB
All DBs
Position
4:complement(37552300..37556421)
Genome browser
AA seq
123 aa
AA seq
DB search
MASLDTDVNMVPAGDGSSGAGPSTINPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAIC
RNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQK
YGH
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacttgataccgacgtcaatatggttcccgccggcgatggatcctccggcgcc
gggccctccaccatcaatccctcatcgtccaccaagaaacccaagcgattcgagattaaa
aagtggaacgccgtctccctctgggcttgggatatcgtggtcgacaattgtgctatttgc
agaaatcatatcatggatctatgcatcgagtgtcaggctaatcaggccagcgcaacaagc
gaggaatgcacagttgcatggggtgtttgcaatcatgccttccacttccattgcattagc
agatggctcaagactcgtcaagtttgccctctggataacagcgagtgggagtttcagaag
tatggtcactag
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